PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG074990.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 727aa MW: 80064.8 Da PI: 6.6574

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG074990.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.1	8e-24	13	114	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k lt sd++++g +++p++ ae+ ++++++ ++l+++d++ + W++++iyr++++r++lt+GW+ Fv a++Lk+gD+v+F ++ TRIDC2BG074990.5 13 FCKNLTASDTSTHGGFSVPRRAAEKLfpqldySMQPPN-QELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFI--RD 102 89*******************999*9555555.49********************************************..45 PP SEE..EEEEE-S CS B3 88 sefelvvkvfrk 99 ++ +l+v+v+r+ TRIDC2BG074990.5 103 EKSQLLVGVRRA 114 77778***97 PP
2	Auxin_resp	114.1	1.3e-37	139	221	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaas++s F+++YnPr+s+s Fvv+v++++ka +++ svGmR+ m+fete+ss+rr++Gt+vgvsd+dp+rWpnSkWr+L+ TRIDC2BG074990.5 139 AAHAASSGSSFTIYYNPRTSPSPFVVPVARYNKANYIQQSVGMRMAMMFETEESSKRRYTGTIVGVSDSDPMRWPNSKWRNLQ 221 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 727 aa Download sequence
GSYAKSKHPA EYFCKNLTAS DTSTHGGFSV PRRAAEKLFP QLDYSMQPPN QELIVRDLHD 60 NMWTFRHIYR GQPKRHLLTT GWSLFVGAKR LKAGDSVLFI RDEKSQLLVG VRRATNQQTA 120 LSSSVLSTDS MHIGVLAAAA HAASSGSSFT IYYNPRTSPS PFVVPVARYN KANYIQQSVG 180 MRMAMMFETE ESSKRRYTGT IVGVSDSDPM RWPNSKWRNL QIEWDEHGYG ERPERVSIWD 240 IETPENTIVF PSASLNSKRQ CLPGYGVPGL DIASVNMSPF QRAPGNPYGN LQHMPAVGSE 300 LAMMMFLNQS GQNIGTPLSC HQSSYSSIIQ NVKQNYMPPS TFGHPIGSIK PESMPSNEAQ 360 QQQLHAPKMQ RGNSESCEVQ PATDSVSASE LHVAGREPRN TDKSPSQSIS EQNGKGEPRV 420 KPRRSKKGSS HKTISENSEL SSAPSRFCDD QQHVSEAELV SCDTKHVNCG NNEGSSGALT 480 HGDFAGQLQC QQVEQNELVS PPKLESSISP DGGKSVNSFP NQASFSQFFD GLDWMVQPPY 540 YQDSNGIQSV SASENIFSPS ANIGSTINTD TLETFQNSCL SDCFPNSIQD FIGSPDLHSL 600 TFLSPEMQNL DVHHDGSNVP STSNSYVQMS FSEDDSGSHM ESIQRGMNNI SSCSQPQTTE 660 GFNLGMYSKL PSLKESQVLS LPEIHNSSRG TSSCSMDAAE YSIDRSAKPL KPPVRTYTKV 720 WYYNTSK

Sequence ? help Back to Top

Protein Sequence Length: 727 aa Download sequence

GSYAKSKHPA EYFCKNLTAS DTSTHGGFSV PRRAAEKLFP QLDYSMQPPN QELIVRDLHD  60
NMWTFRHIYR GQPKRHLLTT GWSLFVGAKR LKAGDSVLFI RDEKSQLLVG VRRATNQQTA  120
LSSSVLSTDS MHIGVLAAAA HAASSGSSFT IYYNPRTSPS PFVVPVARYN KANYIQQSVG  180
MRMAMMFETE ESSKRRYTGT IVGVSDSDPM RWPNSKWRNL QIEWDEHGYG ERPERVSIWD  240
IETPENTIVF PSASLNSKRQ CLPGYGVPGL DIASVNMSPF QRAPGNPYGN LQHMPAVGSE  300
LAMMMFLNQS GQNIGTPLSC HQSSYSSIIQ NVKQNYMPPS TFGHPIGSIK PESMPSNEAQ  360
QQQLHAPKMQ RGNSESCEVQ PATDSVSASE LHVAGREPRN TDKSPSQSIS EQNGKGEPRV  420
KPRRSKKGSS HKTISENSEL SSAPSRFCDD QQHVSEAELV SCDTKHVNCG NNEGSSGALT  480
HGDFAGQLQC QQVEQNELVS PPKLESSISP DGGKSVNSFP NQASFSQFFD GLDWMVQPPY  540
YQDSNGIQSV SASENIFSPS ANIGSTINTD TLETFQNSCL SDCFPNSIQD FIGSPDLHSL  600
TFLSPEMQNL DVHHDGSNVP STSNSYVQMS FSEDDSGSHM ESIQRGMNNI SSCSQPQTTE  660
GFNLGMYSKL PSLKESQVLS LPEIHNSSRG TSSCSMDAAE YSIDRSAKPL KPPVRTYTKV  720
WYYNTSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19850.1	1e-134	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG074990.5