PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG074990.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 847aa    MW: 93610 Da    PI: 5.7671
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG074990.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B369.64.3e-2241141199
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k lt sd++++g +++p++ ae+       ++++++ ++l+++d++ + W++++i  ++++r++lt+GW+ Fv a++Lk+gD+v+F   ++
  TRIDC2BG074990.4  41 FCKNLTASDTSTHGGFSVPRRAAEKLfpqldySMQPPN-QELIVRDLHDNMWTFRHI-YRQPKRHLLTTGWSLFVGAKRLKAGDSVLFI--RD 129
                       89*********************999*****9555555.49***************7.5667799************************..45 PP

                       SEE..EEEEE-S CS
                B3  88 sefelvvkvfrk 99 
                       ++ +l+v+v+r+
  TRIDC2BG074990.4 130 EKSQLLVGVRRA 141
                       77778*****97 PP
2Auxin_resp109.24.4e-36166249183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaas++s F+++YnPr+s+s Fvv+v++++ka +++ svGmR+ m+fete+ss+r+  +Gt+vgvsd+dp+rWpnSkWr+L+
  TRIDC2BG074990.4 166 AAHAASSGSSFTIYYNPRTSPSPFVVPVARYNKANYIQQSVGMRMAMMFETEESSKRSRyTGTIVGVSDSDPMRWPNSKWRNLQ 249
                       79****************************************************999766**********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 847 aa     Download sequence    
DKDTDEVYAQ MTLQPVNSET DVFPIPSLGS YAKSKHPAEY FCKNLTASDT STHGGFSVPR  60
RAAEKLFPQL DYSMQPPNQE LIVRDLHDNM WTFRHIYRQP KRHLLTTGWS LFVGAKRLKA  120
GDSVLFIRDE KSQLLVGVRR ATNQQTALSS SVLSTDSMHI GVLAAAAHAA SSGSSFTIYY  180
NPRTSPSPFV VPVARYNKAN YIQQSVGMRM AMMFETEESS KRSRYTGTIV GVSDSDPMRW  240
PNSKWRNLQI EWDEHGYGER PERVSIWDIE TPENTIVFPS ASLNSKRQCL PGYGVPGLDI  300
ASVNMSPFQR APGNPYGNLQ HMPAVGSELA MMMFLNQSGQ NIGTPLSCHQ SSYSSIIQNV  360
KQNYMPPSTF GHPIGSIKPE SMPSNEAQQQ QLHAPKMQRG NSESCEVQPA TDSVSASELH  420
VAGREPRNTD KSPSQSISEQ NGKGEPRVKP RRSKKGSSHK TISENSELSS APSRFCDDQQ  480
HVSEAELVSC DTKHVNCGNN EGSSGALTHG DFAGQLQCQQ VEQNELVSPP KLESSISPDG  540
GKSVNSFPNQ ASFSQFFDGL DWMVQPPYYQ DSNGIQSVSA SENIFSPSAN IGSTINTDTL  600
ETFQNSCLSD CFPNSIQDFI GSPDLHSLTF LSPEMQNLDV HHDGSNVPST SNSYVQMSFS  660
EDDSGSHMES IQRGMNNISS CSQPQTTEGF NLGMYSKLPS LKESQVLSLP EIHNSSRGTS  720
SCSMDAAEYS IDRSAKPLKP PVRTYTKVQK LGSVGRSIDV TRYRDYRELR SAIASMFGLQ  780
GKLEHPASSD WKLVYVDYEN DVLLVGDDPW EEFINCVRCI RILSPSEVQQ MSENGMQVLN  840
DCIQADQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.11e-146ARF family protein