PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG074990.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 879aa    MW: 97138.2 Da    PI: 6.1414
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG074990.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B369.54.5e-2274174199
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k lt sd++++g +++p++ ae+       ++++++ ++l+++d++ + W++++i  ++++r++lt+GW+ Fv a++Lk+gD+v+F   ++
  TRIDC2BG074990.3  74 FCKNLTASDTSTHGGFSVPRRAAEKLfpqldySMQPPN-QELIVRDLHDNMWTFRHI-YRQPKRHLLTTGWSLFVGAKRLKAGDSVLFI--RD 162
                       89*********************999*****9555555.49***************7.5667799************************..45 PP

                       SEE..EEEEE-S CS
                B3  88 sefelvvkvfrk 99 
                       ++ +l+v+v+r+
  TRIDC2BG074990.3 163 EKSQLLVGVRRA 174
                       77778*****97 PP
2Auxin_resp113.81.6e-37199281183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaas++s F+++YnPr+s+s Fvv+v++++ka +++ svGmR+ m+fete+ss+rr++Gt+vgvsd+dp+rWpnSkWr+L+
  TRIDC2BG074990.3 199 AAHAASSGSSFTIYYNPRTSPSPFVVPVARYNKANYIQQSVGMRMAMMFETEESSKRRYTGTIVGVSDSDPMRWPNSKWRNLQ 281
                       79*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 879 aa     Download sequence    
AATTKKTPNS RIPNYPSLPS QLLCQVHNIT MHADKDTDEV YAQMTLQPVN SETDVFPIPS  60
LGSYAKSKHP AEYFCKNLTA SDTSTHGGFS VPRRAAEKLF PQLDYSMQPP NQELIVRDLH  120
DNMWTFRHIY RQPKRHLLTT GWSLFVGAKR LKAGDSVLFI RDEKSQLLVG VRRATNQQTA  180
LSSSVLSTDS MHIGVLAAAA HAASSGSSFT IYYNPRTSPS PFVVPVARYN KANYIQQSVG  240
MRMAMMFETE ESSKRRYTGT IVGVSDSDPM RWPNSKWRNL QIEWDEHGYG ERPERVSIWD  300
IETPENTIVF PSASLNSKRQ CLPGYGVPGL DIASVNMSPF QRAPGNPYGN LQHMPAVGSE  360
LAMMMFLNQS GQNIGTPLSC HQSSYSSIIQ NVKQNYMPPS TFGHPIGSIK PESMPSNEAQ  420
QQQLHAPKMQ RGNSESCEVQ PATDSVSASE LHVAGREPRN TDKSPSQSIS EQNGKGEPRV  480
KPRRSKKGSS HKTISENSEL SSAPSRFCDD QQHVSEAELV SCDTKHVNCG NNEGSSGALT  540
HGDFAGQLQC QQVEQNELVS PPKLESSISP DGGKSVNSFP NQASFSQFFD GLDWMVQPPY  600
YQDSNGIQSV SASENIFSPS ANIGSTINTD TLETFQNSCL SDCFPNSIQD FIGSPDLHSL  660
TFLSPEMQNL DVHHDGSNVP STSNSYVQMS FSEDDSGSHM ESIQRGMNNI SSCSQPQTTE  720
GFNLGMYSKL PSLKESQVLS LPEIHNSSRG TSSCSMDAAE YSIDRSAKPL KPPVRTYTKV  780
QKLGSVGRSI DVTRYRDYRE LRSAIASMFG LQGKLEHPAS SDWKLVYVDY ENDVLLVGDD  840
PWEEFINCVR CIRILSPSEV QQMSENGMQV LNDCIQADQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.11e-166ARF family protein