PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG074990.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 950aa    MW: 104900 Da    PI: 6.17
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG074990.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.61.2e-23144245199
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k lt sd++++g +++p++ ae+       ++++++ ++l+++d++ + W++++iyr++++r++lt+GW+ Fv a++Lk+gD+v+F   ++
  TRIDC2BG074990.2 144 FCKNLTASDTSTHGGFSVPRRAAEKLfpqldySMQPPN-QELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFI--RD 233
                       89*********************999*****9555555.49************************************************..45 PP

                       SEE..EEEEE-S CS
                B3  88 sefelvvkvfrk 99 
                       ++ +l+v+v+r+
  TRIDC2BG074990.2 234 EKSQLLVGVRRA 245
                       77778*****97 PP
2Auxin_resp113.61.8e-37270352183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaas++s F+++YnPr+s+s Fvv+v++++ka +++ svGmR+ m+fete+ss+rr++Gt+vgvsd+dp+rWpnSkWr+L+
  TRIDC2BG074990.2 270 AAHAASSGSSFTIYYNPRTSPSPFVVPVARYNKANYIQQSVGMRMAMMFETEESSKRRYTGTIVGVSDSDPMRWPNSKWRNLQ 352
                       79*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 950 aa     Download sequence    
QEKQQQQLPA FGVLRNAAAL LDEMQLMGEA QGAKKVINSE LWHACAGPLV CLPQRGSLVY  60
YFPQGHSEQV AATTKKTPNS RIPNYPSLPS QLLCQVHNIT MHADKDTDEV YAQMTLQPVN  120
SETDVFPIPS LGSYAKSKHP AEYFCKNLTA SDTSTHGGFS VPRRAAEKLF PQLDYSMQPP  180
NQELIVRDLH DNMWTFRHIY RGQPKRHLLT TGWSLFVGAK RLKAGDSVLF IRDEKSQLLV  240
GVRRATNQQT ALSSSVLSTD SMHIGVLAAA AHAASSGSSF TIYYNPRTSP SPFVVPVARY  300
NKANYIQQSV GMRMAMMFET EESSKRRYTG TIVGVSDSDP MRWPNSKWRN LQIEWDEHGY  360
GERPERVSIW DIETPENTIV FPSASLNSKR QCLPGYGVPG LDIASVNMSP FQRAPGNPYG  420
NLQHMPAVGS ELAMMMFLNQ SGQNIGTPLS CHQSSYSSII QNVKQNYMPP STFGHPIGSI  480
KPESMPSNEA QQQQLHAPKM QRGNSESCEV QPATDSVSAS ELHVAGREPR NTDKSPSQSI  540
SEQNGKGEPR VKPRRSKKGS SHKTISENSE LSSAPSRFCD DQQHVSEAEL VSCDTKHVNC  600
GNNEGSSGAL THGDFAGQLQ CQQVEQNELV SPPKLESSIS PDGGKSVNSF PNQASFSQFF  660
DGLDWMVQPP YYQDSNGIQS VSASENIFSP SANIGSTINT DTLETFQNSC LSDCFPNSIQ  720
DFIGSPDLHS LTFLSPEMQN LDVHHDGSNV PSTSNSYVQM SFSEDDSGSH MESIQRGMNN  780
ISSCSQPQTT EGFNLGMYSK LPSLKESQVL SLPEIHNSSR GTSSCSMDAA EYSIDRSAKP  840
LKPPVRTYTK VQKLGSVGRS IDVTRYRDYR ELRSAIASMF GLQGKLEHPA SSDWKLVYVD  900
YENDVLLVGD DPWEEFINCV RCIRILSPSE VQQMSENGMQ VLNDCIQADQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein