PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG073900.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 379aa    MW: 40400.9 Da    PI: 8.4843
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG073900.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.33.5e-052622991254
                       HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       R +++ +++  L++l+ +      +K + a++L +++eYIk L
  TRIDC2BG073900.1 262 RKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFL 299
                       677888999*******998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
ATDGGKAKSC TTTASSESPG NNSSVTFQET ASISDPAAGF TDWNSPYMSN GGAGNMHGFL  60
QVGHHDMSSR TDQQSHMNAS SLMNDPSPNN LDLALQGHHH HQHQQAGDHH RQQQLLSSLG  120
APELLLSPNS PYGFQSSSLL RSLLEPTAKP APAAGIQQYQ YQQMGGQAGV REPLQFTNDA  180
AFWNPSAGFG MAMPAPAAAE QTSVRSVKRS SPAPRGANLA LKSVLEGVGD SSSIVTKKAN  240
SEPAFKKPRT ETPSSLPTFK VRKEKLGDRI TALQQLVSPF GKTDTASVLH ETIEYIKFLH  300
DQAGVLSAPY LKRGHHQHQV PQYLNLKSSS ASPDKSCKDG SGEVSLKGRG LCLVPISSTF  360
AVASDGPVDF WTPFGGQFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.14e-46bHLH family protein