PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG069560.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 415aa MW: 45024.2 Da PI: 7.5261

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG069560.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.7	2.1e-16	39	83	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++l+++a +++G W++I +++g ++t+ q++s+ qk+ TRIDC2BG069560.1 39 REKWTEEEHKLFLEAMQLHGRA-WRRIQEHIG-TKTAVQIRSHAQKF 83 789***************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MARFQETKPD LLNSGSDTRM MAEARLPKAR KPYMITKQRE KWTEEEHKLF LEAMQLHGRA 60 WRRIQEHIGT KTAVQIRSHA QKFFSKVTRD SSGDSGGSSS GAGPPIQIPP PRPKRKSVHP 120 YPCNLRSAQP GKHAHAALLR VDKPQLSMCE QGNGSPTSVV TTSQIGLGSE SFDSDTSTID 180 IEERCPTPST GTAEVAVQAP PTNDAKKSKG SSTSEEVVCD NTSDAPVLKL FGKTVVVNES 240 HQLPSPGTCD LQTAADMELD TSAETPTSAP EANTWSPWLA NSQQFMYYVP QGAVFFGYNN 300 GSVPYPVPSS PKAGQQHQQQ ASEAAAELRR REASLNTASS SVAETTARNS AESCTGAVGG 360 DDEVVHAAGL RERVSPTLVQ QRGFMPYKRC AAETKAMQPQ APREEADREM TRLCL

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MARFQETKPD LLNSGSDTRM MAEARLPKAR KPYMITKQRE KWTEEEHKLF LEAMQLHGRA  60
WRRIQEHIGT KTAVQIRSHA QKFFSKVTRD SSGDSGGSSS GAGPPIQIPP PRPKRKSVHP  120
YPCNLRSAQP GKHAHAALLR VDKPQLSMCE QGNGSPTSVV TTSQIGLGSE SFDSDTSTID  180
IEERCPTPST GTAEVAVQAP PTNDAKKSKG SSTSEEVVCD NTSDAPVLKL FGKTVVVNES  240
HQLPSPGTCD LQTAADMELD TSAETPTSAP EANTWSPWLA NSQQFMYYVP QGAVFFGYNN  300
GSVPYPVPSS PKAGQQHQQQ ASEAAAELRR REASLNTASS SVAETTARNS AESCTGAVGG  360
DDEVVHAAGL RERVSPTLVQ QRGFMPYKRC AAETKAMQPQ APREEADREM TRLCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	8e-36	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG069560.1