PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG066730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 218aa MW: 25908.1 Da PI: 8.8326 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 40.3 | 8.5e-13 | 2 | 47 | 37 | 86 |
trihelix 37 kmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 ++r+rg++r++ qCk+kw+nl +ryk ++++ ++ ++cp+f++l+ TRIDC2BG066730.1 2 ALRARGYRRTADQCKCKWKNLVNRYKGKETSDPEN----GRQCPFFEELH 47 5799***********************99999974....678******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
DALRARGYRR TADQCKCKWK NLVNRYKGKE TSDPENGRQC PFFEELHAVF TERARNMQRQ 60 LLQSESGTSV KKKLKRPSGD RSSGESDDNE YGVEVSDDEK PMISKKRKAS DKGQPSQRMA 120 ENSRTGSSSI HDLLQEFLVQ QQHVDMLWHE TMERRAQERL IFEQEWRQSM QKLEQERLML 180 EQSWIEREEQ RRMREEARAQ KRDSLMTTLL NKLLQEDL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 72 | 108 | KKLKRPSGDRSSGESDDNEYGVEVSDDEKPMISKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38250.1 | 1e-23 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG066730.1 |