PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG062970.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 309aa    MW: 32613.6 Da    PI: 7.8666
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG062970.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.00087172194123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++Cp C+k+F++   L  H  +H
  TRIDC2BG062970.2 172 FQCPACKKVFRSYQALGGHRASH 194
                       89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MAKNTCKLCC RRFASPRALA GHMRSHSIKV ARSQISSASS ASTSVAAGDD DAAADARMMP  60
IQAYVLRGKP KRRVRLAESD FSDRESEADY PSQSPDAKRV HGGSRDAEPV SSVSDAATPE  120
EDVALSLMML SRDSWPAAAW QPSSYRAADS DDGSDGGGEV EPRAAEQKRT RFQCPACKKV  180
FRSYQALGGH RASHVRGGRG GCCAPPLNPP PPPPASTHLQ PLLECEEGTK PHPHECPCCF  240
RVFASGQALG GHKRSQLCPG AAAVAAPGAD HPAAAMKSLG LIDLNLPAPF EDLEVSAVSD  300
PFLSARPGH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16975KPKRRVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02030.14e-32C2H2 family protein