PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG056460.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 279aa    MW: 30321.9 Da    PI: 7.2508
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG056460.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.58.7e-151562148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W++eEd++l d + ++G  +W+t++ + g+ R +k+c++rw +yl
  TRIDC2BG056460.1 15 KGLWSPEEDQKLRDFIVRYGHSCWSTVPVKAGLQRNGKSCRLRWINYL 62
                      678*******************************************97 PP
2Myb_DNA-binding50.16.2e-1669113248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       g ++ eE+e    +++ lG++ W+ Ia++++ gRt++++k++w++yl
  TRIDC2BG056460.1  69 GMFSREEEETVMSLHATLGNK-WSQIAQHLP-GRTDNEVKNYWNSYL 113
                       56999****************.*********.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MGCKSCQKPK AQHRKGLWSP EEDQKLRDFI VRYGHSCWST VPVKAGLQRN GKSCRLRWIN  60
YLRPGLKHGM FSREEEETVM SLHATLGNKW SQIAQHLPGR TDNEVKNYWN SYLKKRVQGA  120
RSPAKSAGSD APRSPTPSES GREDSTVNRP SNSGSSGPLE SPSTADESSS LTVSGATASI  180
RPHAPVLPKV MFADWLDMDM DYGTGLMAPS ALDAAFDGSP AQQGVSHQGP LQVEGLCDAV  240
DSLHGLSNGG WDFDVDKMHM QGGAGFCDLL SMSEFLGIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52260.13e-63MYB family protein