PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG056440.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 277aa MW: 30183.7 Da PI: 7.1773 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.2 | 2.5e-15 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l d++ ++G +W+t++ + g+ R +k+c++rw +yl TRIDC2BG056440.2 15 KGLWSPEEDQKLRDYIVRYGHSCWSTVPVKAGLQRNGKSCRLRWINYL 62 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.3 | 1.1e-15 | 69 | 113 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g +++ E+e +++ lG++ W++Ia++++ gRt++++k++w++yl TRIDC2BG056440.2 69 GMFSQAEEETVMSLHATLGNK-WSRIAQHLP-GRTDNEVKNYWNSYL 113 5699*****************.*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MGCKSCQKPK AQHWKGLWSP EEDQKLRDYI VRYGHSCWST VPVKAGLQRN GKSCRLRWIN 60 YLRPGLKHGM FSQAEEETVM SLHATLGNKW SRIAQHLPGR TDNEVKNYWN SYLKKRVEGA 120 RAPAKSAGSD APRSPTPSDS GRERSTVNQL SNSGSSGPPE SSSTADDSSS LTGPGAAALI 180 RPHAPVLPKV MFADWLDMDM EYGTSLLRPS ALDTAFDCSQ AQQGASNTVD GRCGTVDSLH 240 GLSDGGICWE FDADEMHMQG GAGFCDLLSM SEFLGIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52260.1 | 9e-61 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG056440.2 |