PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG056410.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 274aa MW: 29534.9 Da PI: 7.1248 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.2 | 2.5e-15 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l d++ ++G +W+t++ + g+ R +k+c++rw +yl TRIDC2BG056410.3 15 KGLWSPEEDQKLRDYIVRYGHSCWSTVPVKAGLQRNGKSCRLRWINYL 62 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.5 | 8.2e-15 | 69 | 113 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g +++ E+e +++ lG++ W+ Ia++++ gRt++++k++w++yl TRIDC2BG056410.3 69 GMFSQAEEETAMSLHATLGNK-WSQIAQHLP-GRTDNEVKNYWNSYL 113 5699*****************.*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MGCKSCQKPK AQHRKGLWSP EEDQKLRDYI VRYGHSCWST VPVKAGLQRN GKSCRLRWIN 60 YLRPGLKHGM FSQAEEETAM SLHATLGNKW SQIAQHLPGR TDNEVKNYWN SYLKKRVEGA 120 RAPAKSAGSD APRSPTPSDS GRERRTVNQP SNSGSSGPPE SSSTGDDSSS LTGPGAAALI 180 RPHAPVLPKV MFADWLDMDM DYGTGLMAPS ALDAAFDCSP VQQGGSNTVD GRCGAEDSLH 240 GLGDGGICWE FEADTQGGAG FCDLLSMSEF LGIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52260.1 | 5e-61 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG056410.3 |