PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG051580.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 808aa MW: 91930.4 Da PI: 8.7643

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG051580.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.8	4.9e-20	56	139	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 Y eY++++GF v+k++s++ +g +++tfvC+k g ++ + + r+r + +tgCka+++vk + +++wev +eleHnH+++ TRIDC2BG051580.1 56 YLEYGYRAGFGVSKRTSHSV--DGVKYRATFVCYKGGIARIKPGL---KARRRLVAKTGCKAMMVVKYNAsENHWEVVFVELEHNHPCN 139 99***********99988..9999**********99887...8999*************99*************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 808 aa Download sequence
MDSLQSDPYT RSSLQMQLID TSTSFETSNL DLVKHEVPTP QVGMTFETVD LAYQSYLEYG 60 YRAGFGVSKR TSHSVDGVKY RATFVCYKGG IARIKPGLKA RRRLVAKTGC KAMMVVKYNA 120 SENHWEVVFV ELEHNHPCNP EMVRFMMCFK DLPDWQREHR PFNAKTRLNP KIHSGRGRPP 180 NQNKDFMVRS FSQSNYSIEA AAKCGKLRFA EGDVEALLIF FDKMQAQNSN FFYNWDMDDE 240 GRLKNVCWVD ARSRAAYQHF SDVVCFDTVY LTYQFVIPLV AFLGINHHGQ FVLLGCGLLG 300 DESPETFSWL FKKWLKCMND KAPEAIITTH SRPVVKAVSE VFLNTRHRYN LWHIMKELPD 360 MSGRVEDKEA ISLRMKKVVY DTITAADFER EWVEMANQYN LHDNRWLTTL FEERAKWVPA 420 YVKDAFWAGI STVRRSERLE AFFDGYITPE TTIKIFIEQF DTAMKLRSDR EAYDDFRSFQ 480 QRPQALSGLL FEEQFANAYT INIFQKFQDQ LKQLMNVTCT EVSRNGSIVT YTVTVIGKER 540 KFDYRVMYNG AEKEVWCICR SFQFKGILCS HALAVLKQEL VMLIPSKYIL DRWRKDYKCP 600 EESKETPIQP EAAKPTGKGT KPENVRDDKV DNLYNDGHQY FADIVEMGAT DPDAMEYVLS 660 VMKEAKEKVR KFEESRKEKR PGESPVSASK KGAKSSKPSA EDVGNSTSAP TMMVAAASAT 720 LAASTPMPVP SCTQMSVPPT MMAMATTSAA VPPGMFLVPM HPHMVFPPFT PGLPTAVPPV 780 APPPAPTANA VGVVSNPTKK RKKRKGNN

Sequence ? help Back to Top

Protein Sequence Length: 808 aa Download sequence

MDSLQSDPYT RSSLQMQLID TSTSFETSNL DLVKHEVPTP QVGMTFETVD LAYQSYLEYG  60
YRAGFGVSKR TSHSVDGVKY RATFVCYKGG IARIKPGLKA RRRLVAKTGC KAMMVVKYNA  120
SENHWEVVFV ELEHNHPCNP EMVRFMMCFK DLPDWQREHR PFNAKTRLNP KIHSGRGRPP  180
NQNKDFMVRS FSQSNYSIEA AAKCGKLRFA EGDVEALLIF FDKMQAQNSN FFYNWDMDDE  240
GRLKNVCWVD ARSRAAYQHF SDVVCFDTVY LTYQFVIPLV AFLGINHHGQ FVLLGCGLLG  300
DESPETFSWL FKKWLKCMND KAPEAIITTH SRPVVKAVSE VFLNTRHRYN LWHIMKELPD  360
MSGRVEDKEA ISLRMKKVVY DTITAADFER EWVEMANQYN LHDNRWLTTL FEERAKWVPA  420
YVKDAFWAGI STVRRSERLE AFFDGYITPE TTIKIFIEQF DTAMKLRSDR EAYDDFRSFQ  480
QRPQALSGLL FEEQFANAYT INIFQKFQDQ LKQLMNVTCT EVSRNGSIVT YTVTVIGKER  540
KFDYRVMYNG AEKEVWCICR SFQFKGILCS HALAVLKQEL VMLIPSKYIL DRWRKDYKCP  600
EESKETPIQP EAAKPTGKGT KPENVRDDKV DNLYNDGHQY FADIVEMGAT DPDAMEYVLS  660
VMKEAKEKVR KFEESRKEKR PGESPVSASK KGAKSSKPSA EDVGNSTSAP TMMVAAASAT  720
LAASTPMPVP SCTQMSVPPT MMAMATTSAA VPPGMFLVPM HPHMVFPPFT PGLPTAVPPV  780
APPPAPTANA VGVVSNPTKK RKKRKGNN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	799	803	KKRKK
2	799	805	KKRKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-111	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG051580.1