PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG050920.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 351aa MW: 37750.4 Da PI: 6.1301

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG050920.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.5	1.7e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +l+ +++q+G+++W++I++ g+ R++k+c++rw +yl TRIDC2BG050920.1 14 RGQWTPEEDNKLLSYITQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYL 61 89********************************************97 PP
2	Myb_DNA-binding	45.2	2.1e-14	68	110	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T E++ +++++ G++ W+ Ia+ ++ gRt++++k++w++ TRIDC2BG050920.1 68 GEFTDAEEQTIIKLHSVVGNR-WSVIAAQLP-GRTDNDVKNHWNT 110 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MGRIPCCEKD NVKRGQWTPE EDNKLLSYIT QHGTRNWRLI PKNAGLQRCG KSCRLRWTNY 60 LRPDLKHGEF TDAEEQTIIK LHSVVGNRWS VIAAQLPGRT DNDVKNHWNT KLKKKLSGMG 120 IDPVTHKSFS HLMAEIATTL APPQVAHLAE AALGCFKDEM LHLLTKKRPT DFPSPAIPDM 180 AAGASGGMAM GSGALITPCF NAPPQADDTI ERIKMGLSRA IMSEPAAPAA DKPWPSGDMS 240 EGLAGMYAAF NPAHATEFRY EGTASGYVLG GDGDQGTSMW SHHSMYSGSS GTEGGRPALQ 300 EKGNDSVGSS GGDDEAEDGK EGGKGASDMS GLFGSDCVLW DLPDELTNNM C

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MGRIPCCEKD NVKRGQWTPE EDNKLLSYIT QHGTRNWRLI PKNAGLQRCG KSCRLRWTNY  60
LRPDLKHGEF TDAEEQTIIK LHSVVGNRWS VIAAQLPGRT DNDVKNHWNT KLKKKLSGMG  120
IDPVTHKSFS HLMAEIATTL APPQVAHLAE AALGCFKDEM LHLLTKKRPT DFPSPAIPDM  180
AAGASGGMAM GSGALITPCF NAPPQADDTI ERIKMGLSRA IMSEPAAPAA DKPWPSGDMS  240
EGLAGMYAAF NPAHATEFRY EGTASGYVLG GDGDQGTSMW SHHSMYSGSS GTEGGRPALQ  300
EKGNDSVGSS GGDDEAEDGK EGGKGASDMS GLFGSDCVLW DLPDELTNNM C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56110.1	1e-113	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG050920.1