PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG048100.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 128aa MW: 13499 Da PI: 8.9124

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG048100.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.4	0.00011	19	41	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C++ F+++ L H++ H TRIDC2BG048100.1 19 FACCYCPRKFRSSQALGGHQNAH 41 78******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 128 aa Download sequence
LSLSLQRSPS SPPRFQAVFA CCYCPRKFRS SQALGGHQNA HKVQRNLARR GRDATTALSL 60 AAAGDQGKAV VDDDSAPLRP ADPDAADAWG GGRVYPPHRQ QGSGAASSGA ARGNEELTDE 120 MIDLSLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80730.1	1e-13	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG048100.1