PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2BG047040.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 276aa MW: 29035.8 Da PI: 8.0152 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 89.8 | 2.6e-28 | 21 | 69 | 3 | 56 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56 +++YkeC++NhAa++Gg+a+DGCgE+mp+ ++++lkCaACgCHR+FHRr TRIDC2BG047040.2 21 GAKYKECMRNHAAAMGGQAFDGCGEYMPA-----SPDSLKCAACGCHRSFHRRA 69 679*************************9.....799***************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 276 aa Download sequence |
MMDHLSLVPY EGGSGAGGDA GAKYKECMRN HAAAMGGQAF DGCGEYMPAS PDSLKCAACG 60 CHRSFHRRAG SLTGGACPAP FFFSPPPPPP PHHHPPPHHP VLQGFLPSAP PRPPQLALPY 120 HAVPAAWHHA LLDPARAGSE TPPRADDCSP GCGSGSFGRK RHRTKFTPEQ KERMRAFAEK 180 QGWRINRDDG GALERFCLEI GVKRNVLKVW MHNHKHQLAS PTSTAAGIGM GMGMGIGINP 240 GVLGTGTGTG ADDDDTDDDS PPRAAVSSPS PSPISV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G69600.1 | 3e-44 | ZF-HD family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2BG047040.2 |