PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG030000.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 258aa    MW: 28153.9 Da    PI: 8.8143
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG030000.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.00014231252323
                       ETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                       Cp+C+k F ++ +L+ H  + H
  TRIDC2BG030000.2 231 CPKCSKGFQDPVLLVEHVEReH 252
                       *****************99888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MIVQVFCLQH RSYTSHKCPK ANNKDVTVVI CPLCAKGVRL NPNEDANITW ESHVNTDCDP  60
SNYQRATKKK KCPVPGCREQ LTFSNTIMCK DCSKEHCLKH RFGPDHKCPG PRKPEPTFPF  120
ANMLRRSQKV EPRANSSGSG SSWWSSSLLN AASSFRSSAE AGMQKLSIAT SEAVQKAKDG  180
VTPSSSGGGL VEQCVQCPAR FSTVEALIEH AEKSHGNNSQ PSRGKVTIDA CPKCSKGFQD  240
PVLLVEHVER EHGGTSKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.12e-97C2H2 family protein