PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG028850.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 614aa MW: 66206.5 Da PI: 6.8265

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG028850.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.5	2.1e-31	230	287	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++C+vkk +er+ d+ ++e++Y+g+Hnh+k TRIDC2BG028850.1 230 DDGYNWRKYGQKHVKGSENPRSYYKCTHPNCEVKKLLERAV-DGLITEVVYKGRHNHPK 287 8**************************************.*************85 PP
2	WRKY	107.3	7.7e-34	403	461	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts+gCpv+k+ver+++dpk v++tYeg+Hnhe TRIDC2BG028850.1 403 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSTGCPVRKHVERASHDPKSVITTYEGKHNHE 461 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
MADSPNPSSG DLPSAAGSSP EKPYPADRRV AALAGAGARY KAMSPARLPI SREPCLTIPA 60 GFSPSALLDS PVLLTNFKVE PSPTTGSLSM AAIMHKNAHP DILPSPRDKS IRAHEDGGSR 120 DFEFKPHLNS SSQSLAPAMS DLKKHEHSMQ NQSMNPSSSS SNMVNENRPP CSRESSLTVN 180 VSAPNQPVGM VGLTDNMPAE VGTSEPQQMN SSDNAMQEPQ SENVADKSAD DGYNWRKYGQ 240 KHVKGSENPR SYYKCTHPNC EVKKLLERAV DGLITEVVYK GRHNHPKPQP NRRLAGGAVP 300 SNQGEERYDG AAAADDKSSN ALSNLANPVN SPGMVEPVPV SVSDDDIDAG GGRPYPGDDA 360 TEEEDLESKR RKMESAGIDA ALMGKPNREP RVVVQTVSEV DILDDGYRWR KYGQKVVKGN 420 PNPRSYYKCT STGCPVRKHV ERASHDPKSV ITTYEGKHNH EVPAARNATH EMSAPPMKNV 480 VHQINSSMPS SIGGMMRACE ARNFSNQYSQ AAETDNVSLD LGVGISPNHS DATNQMQSSG 540 PDQMQYQMQS MASMYGNMRH PSSMAVPTVQ GNSAGRMYGS REEKGNEGFT FRATPMDHSA 600 NLCYSGAGNL VMGP

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

MADSPNPSSG DLPSAAGSSP EKPYPADRRV AALAGAGARY KAMSPARLPI SREPCLTIPA  60
GFSPSALLDS PVLLTNFKVE PSPTTGSLSM AAIMHKNAHP DILPSPRDKS IRAHEDGGSR  120
DFEFKPHLNS SSQSLAPAMS DLKKHEHSMQ NQSMNPSSSS SNMVNENRPP CSRESSLTVN  180
VSAPNQPVGM VGLTDNMPAE VGTSEPQQMN SSDNAMQEPQ SENVADKSAD DGYNWRKYGQ  240
KHVKGSENPR SYYKCTHPNC EVKKLLERAV DGLITEVVYK GRHNHPKPQP NRRLAGGAVP  300
SNQGEERYDG AAAADDKSSN ALSNLANPVN SPGMVEPVPV SVSDDDIDAG GGRPYPGDDA  360
TEEEDLESKR RKMESAGIDA ALMGKPNREP RVVVQTVSEV DILDDGYRWR KYGQKVVKGN  420
PNPRSYYKCT STGCPVRKHV ERASHDPKSV ITTYEGKHNH EVPAARNATH EMSAPPMKNV  480
VHQINSSMPS SIGGMMRACE ARNFSNQYSQ AAETDNVSLD LGVGISPNHS DATNQMQSSG  540
PDQMQYQMQS MASMYGNMRH PSSMAVPTVQ GNSAGRMYGS REEKGNEGFT FRATPMDHSA  600
NLCYSGAGNL VMGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-119	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG028850.1