PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG028490.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 159aa    MW: 17492.4 Da    PI: 4.2715
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG028490.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS115.66.3e-361158235374
              GRAS 235 sPkvvvvveqeadh.nse.............sFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetle 313
                       +P+vv+vve+ead+   +              Fl+ f e l+++sa +dsle+++p++s+er  +Er   gr+iv++v+c  +e+ er+et++
  TRIDC2BG028490.2   1 EPRVVTVVEEEADLvA-TdpdasdeggdteaAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERG-AGRAIVDLVSCPASESMERRETAA 91 
                       59**********9953.44799999****99*************************************.************************ PP

              GRAS 314 kWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.......sgslvlgWkdrpLvsvSaWr 374
                        W +rl++aGF+pvp+se++a+++++llr++  +g+++ e         + ++l Wk++pLv++SaWr
  TRIDC2BG028490.2  92 AWARRLRSAGFSPVPFSEDVADDVRSLLRRYR-EGWSMREAgtddsaaGAGVFLAWKEQPLVWASAWR 158
                       ********************************.88888866666666455566**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
EPRVVTVVEE EADLVATDPD ASDEGGDTEA AFLKVFGEGL RFFSAYMDSL EESFPKTSNE  60
RLALERGAGR AIVDLVSCPA SESMERRETA AAWARRLRSA GFSPVPFSED VADDVRSLLR  120
RYREGWSMRE AGTDDSAAGA GVFLAWKEQP LVWASAWRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.13e-47GRAS family protein