PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG028490.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 595aa    MW: 64026.6 Da    PI: 5.9768
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG028490.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS310.93e-951905942374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.fsevsPilkf 93 
                        +lL+ecA+av++++ +++q+l++ l+elasp+gd  q+la+yf+++L arl+ s++++ ++l++ ++++++  +++  + l f+e+sP+  f
  TRIDC2BG028490.1 190 SQLLMECARAVATRESQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTLRTLAAATDRNTS-FDSTRRTALrFQELSPWSSF 281
                       589************************************************************999998544.4444444446********** PP

              GRAS  94 shltaNqaIleavege.......ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.....skeeleetgerLakfAeelg 173
                       +h++aN aIle++ ++       +r Hi+D++ + ++QWp+Ll+aLa+R+ +++p+l iT+v+s++++      ++ ++e+g+r++kfA+ +g
  TRIDC2BG028490.1 282 GHVAANGAILESFLEAaaassepQRFHILDLSNTFCTQWPTLLEALATRSpDDTPHLSITTVVSAAPSaptsaVQRVMREIGQRMEKFARLMG 374
                       ***********987766667778999***********************9899**********99888899989999**************** PP

              GRAS 174 vpfefnvlvak.rledleleeLrvkp...gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nse.......... 251
                       vpf+f++++++ +l++l+l++L+++       +aVn++ +l  ++  ++  +  r ++   +++l+P+vv+vve+ead+   +          
  TRIDC2BG028490.1 375 VPFRFRAVHHSgDLAELDLDSLDLRGggaTTGIAVNCMNSLRGVV--PGGARR-RGAFAASLRRLEPRVVTVVEEEADLvA-Tdpdasdeggd 463
                       ********8888*************96555569***********9..555555.89**********************953.4479999**** PP

              GRAS 252 ...sFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklll 341
                           Fl+ f e l+++sa +dsle+++p++s+er  +Er   gr+iv++v+c  +e+ er+et++ W +rl++aGF+pvp+se++a+++++ll
  TRIDC2BG028490.1 464 teaAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERG-AGRAIVDLVSCPASESMERRETAAAWARRLRSAGFSPVPFSEDVADDVRSLL 555
                       **9*************************************.**************************************************** PP

              GRAS 342 rkvksdgyrveee.......sgslvlgWkdrpLvsvSaWr 374
                       r++  +g+++ e         + ++l Wk++pLv++SaWr
  TRIDC2BG028490.1 556 RRYR-EGWSMREAgtddsaaGAGVFLAWKEQPLVWASAWR 594
                       ****.88888866666666455566**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 595 aa     Download sequence    
MDTLFRLVSL QASEQQQQQQ QSASYNSRST TSSGSRSSSH QTNASYNYYH HSSSSGGGGG  60
GGQYYYSQQQ QPQQSYYLEP YQEECGGNAH QHHLYMDEDF SSSSSSRQHF HSHGGAAHPP  120
TSSATPTAPT PPLSTSSTAG GAGHALFEAA DLSFPPDLNL DFSSPASSSG AGGTASSAAV  180
GGGGGGRWAS QLLMECARAV ATRESQRVQQ LMWMLNELAS PYGDVEQKLA SYFLQGLFAR  240
LTASGPRTLR TLAAATDRNT SFDSTRRTAL RFQELSPWSS FGHVAANGAI LESFLEAAAA  300
SSEPQRFHIL DLSNTFCTQW PTLLEALATR SPDDTPHLSI TTVVSAAPSA PTSAVQRVMR  360
EIGQRMEKFA RLMGVPFRFR AVHHSGDLAE LDLDSLDLRG GGATTGIAVN CMNSLRGVVP  420
GGARRRGAFA ASLRRLEPRV VTVVEEEADL VATDPDASDE GGDTEAAFLK VFGEGLRFFS  480
AYMDSLEESF PKTSNERLAL ERGAGRAIVD LVSCPASESM ERRETAAAWA RRLRSAGFSP  540
VPFSEDVADD VRSLLRRYRE GWSMREAGTD DSAAGAGVFL AWKEQPLVWA SAWRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-121GRAS family protein