PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG026190.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NF-YA | ||||||||
Protein Properties | Length: 300aa MW: 32750.8 Da PI: 10.1968 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 102.4 | 4.4e-32 | 148 | 204 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep++VNaKQy++Il+RRq Rakle+++kl k+rkpylheSRh+hA++R+Rg+gGrF TRIDC2BG026190.7 148 EEPMFVNAKQYHAILRRRQIRAKLEAQNKL-VKARKPYLHESRHRHAMKRARGTGGRF 204 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MEDHPGHPIS NYDFLSGNGC HTKKLVHKNY DRNSSSAKSG RSQQEASATS DCSLNEQHTS 60 RPPSQSDNDN DHGKPDQHMV KPLLSLGNPE TVAPPPMLDC SQSFAYIPYT ADAYAGIFPG 120 YASHAIVHPQ LNAATNSRVP LPVEPAAEEP MFVNAKQYHA ILRRRQIRAK LEAQNKLVKA 180 RKPYLHESRH RHAMKRARGT GGRFLNTKQL EEQKQKQASG GASCTKVLGK NTLLQSSSAF 240 APSASAPSNM SSFSTTGMLA NQERTCFPSV GFRPTVSFSA LNGNGKLAPN GMHQRASMMR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 189 | 198 | RHRHAMKRAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54160.1 | 7e-34 | NF-YA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG026190.7 |