PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG023880.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 708aa MW: 76973.2 Da PI: 4.5795

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG023880.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.3	4e-14	6	50	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +W++eEd+ l ++ +G+++W+ Ia + +t+ qc+ rw++yl TRIDC2BG023880.9 6 SWSAEEDDVLRAQIAHHGTDNWTVIATQFK-DKTARQCRRRWYNYL 50 6**************************9.************7 PP
2	Myb_DNA-binding	41.2	3.7e-13	56	99	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W+ eEd ll +a k+lG++ W+ Ia+ + gRt++ +k+r+ + TRIDC2BG023880.9 56 KGGWSREEDMLLCEAQKLLGNK-WTEIAKVVS-GRTDNAVKNRFST 99 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
DRHIVSWSAE EDDVLRAQIA HHGTDNWTVI ATQFKDKTAR QCRRRWYNYL NTECKKGGWS 60 REEDMLLCEA QKLLGNKWTE IAKVVSGRTD NAVKNRFSTL CKRRAKDDEL LEENGTVCSN 120 ASAKRVLTQS GGVTCAAPGS SPPIKNMSSC KPDFKENLAP NMRSFGQQKS IRQDSRQPLA 180 SICPDNQSVN IVKTQSLVTK TSTKQLHGEE QSCVKHDGNF LKRNDPKLAT LLQQADLLSS 240 LATKVNTENT SQSMDEAWQK LQHHLVKKDD NDMSESSMSG TASLLDDLDD LIVDPYENEE 300 EDEQKSREQN GATSQVAPDQ IMDNCPVDQI AEESSLCGNT LSSTMEPCPV AEILAHINLG 360 EAAEDMGLHF MEYSSPTHAA QAQQAKADAE IPASVDLSES AEVQAQQAKA DAEIPVSVDL 420 SEAAEGSWSQ FMEYTSPAHT VLHAEGDAET PASVKLSEAA EGSLPQCMEH MSPAHTLLRA 480 KTDSEIPASA NSNEAAEGSW SQFMEYMSPA HIVLHAKADA ETPASVNLGE AAEGSLPQCM 540 EPMSPAHTLL RAKTDYEIPA SANLSEAAKD DSLQCTEYTS PARADLQANA DAEISEDFSE 600 VAQDSRLQCA KFTSPAHTAI KGKAVAKKGT SENCSDVPED SSTQPCMEFT SPAHTVPTFH 660 PFTDNVPTPK ITASERNFLL SVLELASPGS KPETSQQPSC KRALLNSL

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

DRHIVSWSAE EDDVLRAQIA HHGTDNWTVI ATQFKDKTAR QCRRRWYNYL NTECKKGGWS  60
REEDMLLCEA QKLLGNKWTE IAKVVSGRTD NAVKNRFSTL CKRRAKDDEL LEENGTVCSN  120
ASAKRVLTQS GGVTCAAPGS SPPIKNMSSC KPDFKENLAP NMRSFGQQKS IRQDSRQPLA  180
SICPDNQSVN IVKTQSLVTK TSTKQLHGEE QSCVKHDGNF LKRNDPKLAT LLQQADLLSS  240
LATKVNTENT SQSMDEAWQK LQHHLVKKDD NDMSESSMSG TASLLDDLDD LIVDPYENEE  300
EDEQKSREQN GATSQVAPDQ IMDNCPVDQI AEESSLCGNT LSSTMEPCPV AEILAHINLG  360
EAAEDMGLHF MEYSSPTHAA QAQQAKADAE IPASVDLSES AEVQAQQAKA DAEIPVSVDL  420
SEAAEGSWSQ FMEYTSPAHT VLHAEGDAET PASVKLSEAA EGSLPQCMEH MSPAHTLLRA  480
KTDSEIPASA NSNEAAEGSW SQFMEYMSPA HIVLHAKADA ETPASVNLGE AAEGSLPQCM  540
EPMSPAHTLL RAKTDYEIPA SANLSEAAKD DSLQCTEYTS PARADLQANA DAEISEDFSE  600
VAQDSRLQCA KFTSPAHTAI KGKAVAKKGT SENCSDVPED SSTQPCMEFT SPAHTVPTFH  660
PFTDNVPTPK ITASERNFLL SVLELASPGS KPETSQQPSC KRALLNSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.1	2e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG023880.9