PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG023880.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 739aa MW: 80284.9 Da PI: 4.685

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG023880.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.3	4.3e-14	11	55	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +W++eEd+ l ++ +G+++W+ Ia + +t+ qc+ rw++yl TRIDC2BG023880.2 11 SWSAEEDDVLRAQIAHHGTDNWTVIATQFK-DKTARQCRRRWYNYL 55 6**************************9.************7 PP
2	Myb_DNA-binding	41.2	3.9e-13	61	104	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W+ eEd ll +a k+lG++ W+ Ia+ + gRt++ +k+r+ + TRIDC2BG023880.2 61 KGGWSREEDMLLCEAQKLLGNK-WTEIAKVVS-GRTDNAVKNRFST 104 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 739 aa Download sequence
SAAKKDRHIV SWSAEEDDVL RAQIAHHGTD NWTVIATQFK DKTARQCRRR WYNYLNTECK 60 KGGWSREEDM LLCEAQKLLG NKWTEIAKVV SGRTDNAVKN RFSTLCKRRA KDDELLEENG 120 TVCSNASAKR VLTQSGGVTC AAPGSSPPIK NMSSCKPDFK ENLAPNMRSF GQQKSIRQDS 180 RQPLASICPD NQSVNIVKTQ SLVTKTSTKQ LHGEEQSCVK HDGNFLKRND PKLATLLQQA 240 DLLSSLATKV NTENTSQSMD EAWQKLQHHL VKKDDNDMSE SSMSGTASLL DDLDDLIVDP 300 YENEEEDEQK SREQNGATSQ VAPDQIMDNC PVDQIAEESS LCGNTLSSTM EPCPVAEILA 360 HINLGEAAED MGLHFMEYSS PTHAAQAQQA KADAEIPASV DLSESAEGSW SQFMEYTSPA 420 HTVLHANSSP AHTVQAQQAK ADAEIPVSVD LSEAAEGSWS QFMEYTSPAH TVLHAEGDAE 480 TPASVKLSEA AEGSLPQCME HMSPAHTLLR AKTDSEIPAS ANSNEAAEGS WSQFMEYMSP 540 AHIVLHAKAD AETPASVNLG EAAEGSLPQC MEPMSPAHTL LRAKTDYEIP ASANLSEAAK 600 DDSLQCTEYT SPARADLQAN ADAEISEDFS EVAQDSRLQC AKFTSPAHTA IKGKAVAKKG 660 TSENCSDVPE DSSTQPCMEF TSPAHTVPTF HPFTDNVPTP KITASERNFL LSVLELASPG 720 SKPETSQQPS CKRALLNSL

Sequence ? help Back to Top

Protein Sequence Length: 739 aa Download sequence

SAAKKDRHIV SWSAEEDDVL RAQIAHHGTD NWTVIATQFK DKTARQCRRR WYNYLNTECK  60
KGGWSREEDM LLCEAQKLLG NKWTEIAKVV SGRTDNAVKN RFSTLCKRRA KDDELLEENG  120
TVCSNASAKR VLTQSGGVTC AAPGSSPPIK NMSSCKPDFK ENLAPNMRSF GQQKSIRQDS  180
RQPLASICPD NQSVNIVKTQ SLVTKTSTKQ LHGEEQSCVK HDGNFLKRND PKLATLLQQA  240
DLLSSLATKV NTENTSQSMD EAWQKLQHHL VKKDDNDMSE SSMSGTASLL DDLDDLIVDP  300
YENEEEDEQK SREQNGATSQ VAPDQIMDNC PVDQIAEESS LCGNTLSSTM EPCPVAEILA  360
HINLGEAAED MGLHFMEYSS PTHAAQAQQA KADAEIPASV DLSESAEGSW SQFMEYTSPA  420
HTVLHANSSP AHTVQAQQAK ADAEIPVSVD LSEAAEGSWS QFMEYTSPAH TVLHAEGDAE  480
TPASVKLSEA AEGSLPQCME HMSPAHTLLR AKTDSEIPAS ANSNEAAEGS WSQFMEYMSP  540
AHIVLHAKAD AETPASVNLG EAAEGSLPQC MEPMSPAHTL LRAKTDYEIP ASANLSEAAK  600
DDSLQCTEYT SPARADLQAN ADAEISEDFS EVAQDSRLQC AKFTSPAHTA IKGKAVAKKG  660
TSENCSDVPE DSSTQPCMEF TSPAHTVPTF HPFTDNVPTP KITASERNFL LSVLELASPG  720
SKPETSQQPS CKRALLNSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.1	1e-71	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG023880.2