PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG023880.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 700aa MW: 76095.2 Da PI: 4.5521

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG023880.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.7	1.3e-13	1	44	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 W++eEd+ l ++ +G+++W+ Ia + +t+ qc+ rw++yl TRIDC2BG023880.12 1 WSAEEDDVLRAQIAHHGTDNWTVIATQFK-DKTARQCRRRWYNYL 44 **************************9.************7 PP
2	Myb_DNA-binding	41.3	3.7e-13	50	93	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W+ eEd ll +a k+lG++ W+ Ia+ + gRt++ +k+r+ + TRIDC2BG023880.12 50 KGGWSREEDMLLCEAQKLLGNK-WTEIAKVVS-GRTDNAVKNRFST 93 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 700 aa Download sequence
WSAEEDDVLR AQIAHHGTDN WTVIATQFKD KTARQCRRRW YNYLNTECKK GGWSREEDML 60 LCEAQKLLGN KWTEIAKVVS GRTDNAVKNR FSTLCKRRAK DDELLEENGT VCSNASAKRV 120 LTQSGGVTCA APGSSPPIKN MSSCKPDFKE NLAPNMRSFG QQKSIRQDSR QPLASICPDN 180 QSVNIVKTQS LVTKTSTKQL HGEEQSCVKH DGNFLKRNDP KLATLLQQAD LLSSLATKVN 240 TENTSQSMDE AWQKLQHHLV KKDDNDMSES SMSGTASLLD DLDDLIVDPY ENEEEDEQKS 300 REQNGATSQV APDQIMDNCP VDQIAEESSL CGNTLSSTME PCPEILAHIN LGEAAEDMGL 360 HFMEYSSPTH AAQAQQAKAD AEIPASVDLS ESAEVQAQQA KADAEIPVSV DLSEAAEGSW 420 SQFMEYTSPA HTVLHAEGDA ETPASVKLSE AAEGSLPQCM EHMSPAHTLL RAKTDSEIPA 480 SANSNEAAEG SWSQFMEYMS PAHIVLHAKA DAETPASVNL GEAAEGSLPQ CMEPMSPAHT 540 LLRAKTDYEI PASANLSEAA KDDSLQCTEY TSPARADLQA NADAEISEDF SEVAQDSRLQ 600 CAKFTSPAHT AIKGKAVAKK GTSENCSDVP EDSSTQPCME FTSPAHTVPT FHPFTDNVPT 660 PKITASERNF LLSVLELASP GSKPETSQQP SCKRALLNSL

Sequence ? help Back to Top

Protein Sequence Length: 700 aa Download sequence

WSAEEDDVLR AQIAHHGTDN WTVIATQFKD KTARQCRRRW YNYLNTECKK GGWSREEDML  60
LCEAQKLLGN KWTEIAKVVS GRTDNAVKNR FSTLCKRRAK DDELLEENGT VCSNASAKRV  120
LTQSGGVTCA APGSSPPIKN MSSCKPDFKE NLAPNMRSFG QQKSIRQDSR QPLASICPDN  180
QSVNIVKTQS LVTKTSTKQL HGEEQSCVKH DGNFLKRNDP KLATLLQQAD LLSSLATKVN  240
TENTSQSMDE AWQKLQHHLV KKDDNDMSES SMSGTASLLD DLDDLIVDPY ENEEEDEQKS  300
REQNGATSQV APDQIMDNCP VDQIAEESSL CGNTLSSTME PCPEILAHIN LGEAAEDMGL  360
HFMEYSSPTH AAQAQQAKAD AEIPASVDLS ESAEVQAQQA KADAEIPVSV DLSEAAEGSW  420
SQFMEYTSPA HTVLHAEGDA ETPASVKLSE AAEGSLPQCM EHMSPAHTLL RAKTDSEIPA  480
SANSNEAAEG SWSQFMEYMS PAHIVLHAKA DAETPASVNL GEAAEGSLPQ CMEPMSPAHT  540
LLRAKTDYEI PASANLSEAA KDDSLQCTEY TSPARADLQA NADAEISEDF SEVAQDSRLQ  600
CAKFTSPAHT AIKGKAVAKK GTSENCSDVP EDSSTQPCME FTSPAHTVPT FHPFTDNVPT  660
PKITASERNF LLSVLELASP GSKPETSQQP SCKRALLNSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.1	8e-67	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG023880.12