PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG023880.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 739aa MW: 80272.8 Da PI: 4.685

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG023880.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.3	4.3e-14	13	57	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +W++eEd+ l ++ +G+++W+ Ia + +t+ qc+ rw++yl TRIDC2BG023880.1 13 SWSAEEDDVLRAQIAHHGTDNWTVIATQFK-DKTARQCRRRWYNYL 57 6**************************9.************7 PP
2	Myb_DNA-binding	41.2	3.9e-13	63	106	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W+ eEd ll +a k+lG++ W+ Ia+ + gRt++ +k+r+ + TRIDC2BG023880.1 63 KGGWSREEDMLLCEAQKLLGNK-WTEIAKVVS-GRTDNAVKNRFST 106 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 739 aa Download sequence
ASSAAKKDRH IVSWSAEEDD VLRAQIAHHG TDNWTVIATQ FKDKTARQCR RRWYNYLNTE 60 CKKGGWSREE DMLLCEAQKL LGNKWTEIAK VVSGRTDNAV KNRFSTLCKR RAKDDELLEE 120 NGTVCSNASA KRVLTQSGGV TCAAPGSSPP IKNMSSCKPD FKENLAPNMR SFGQQKSIRQ 180 DSRQPLASIC PDNQSVNIVK TQSLVTKTST KQLHGEEQSC VKHDGNFLKR NDPKLATLLQ 240 QADLLSSLAT KVNTENTSQS MDEAWQKLQH HLVKKDDNDM SESSMSGTAS LLDDLDDLIV 300 DPYENEEEDE QKSREQNGAT SQVAPDQIMD NCPVDQIAEE SSLCGNTLSS TMEPCPEILA 360 HINLGEAAED MGLHFMEYSS PTHAAQAQQA KADAEIPASV DLSESAEGSW SQFMEYTSPA 420 HTVLHANSSP AHTVQAQQAK ADAEIPVSVD LSEAAEGSWS QFMEYTSPAH TVLHAEGDAE 480 TPASVKLSEA AEGSLPQCME HMSPAHTLLR AKTDSEIPAS ANSNEAAEGS WSQFMEYMSP 540 AHIVLHAKAD AETPASVNLG EAAEGSLPQC MEPMSPAHTL LRAKTDYEIP ASANLSEAAK 600 DDSLQCTEYT SPARADLQAN ADAEISEDFS EVAQDSRLQC AKFTSPAHTA IKGKAVAKKG 660 TSENCSDVPE DSSTQPCMEF TSPAHTVPTF HPFTDNVPTP KITASERNFL LSVLELASPG 720 SKPETSQQPS CKRALLNSL

Sequence ? help Back to Top

Protein Sequence Length: 739 aa Download sequence

ASSAAKKDRH IVSWSAEEDD VLRAQIAHHG TDNWTVIATQ FKDKTARQCR RRWYNYLNTE  60
CKKGGWSREE DMLLCEAQKL LGNKWTEIAK VVSGRTDNAV KNRFSTLCKR RAKDDELLEE  120
NGTVCSNASA KRVLTQSGGV TCAAPGSSPP IKNMSSCKPD FKENLAPNMR SFGQQKSIRQ  180
DSRQPLASIC PDNQSVNIVK TQSLVTKTST KQLHGEEQSC VKHDGNFLKR NDPKLATLLQ  240
QADLLSSLAT KVNTENTSQS MDEAWQKLQH HLVKKDDNDM SESSMSGTAS LLDDLDDLIV  300
DPYENEEEDE QKSREQNGAT SQVAPDQIMD NCPVDQIAEE SSLCGNTLSS TMEPCPEILA  360
HINLGEAAED MGLHFMEYSS PTHAAQAQQA KADAEIPASV DLSESAEGSW SQFMEYTSPA  420
HTVLHANSSP AHTVQAQQAK ADAEIPVSVD LSEAAEGSWS QFMEYTSPAH TVLHAEGDAE  480
TPASVKLSEA AEGSLPQCME HMSPAHTLLR AKTDSEIPAS ANSNEAAEGS WSQFMEYMSP  540
AHIVLHAKAD AETPASVNLG EAAEGSLPQC MEPMSPAHTL LRAKTDYEIP ASANLSEAAK  600
DDSLQCTEYT SPARADLQAN ADAEISEDFS EVAQDSRLQC AKFTSPAHTA IKGKAVAKKG  660
TSENCSDVPE DSSTQPCMEF TSPAHTVPTF HPFTDNVPTP KITASERNFL LSVLELASPG  720
SKPETSQQPS CKRALLNSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.1	1e-71	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG023880.1