PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG023730.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 171aa MW: 19040.8 Da PI: 9.7892

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG023730.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.5	2.4e-11	14	45	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT+eEd+ lv +v+++G+g+W++++ + g TRIDC2BG023730.1 14 KGPWTPEEDLVLVSYVQEHGPGNWRAVPTRTG 45 79************************998766 PP
2	Myb_DNA-binding	52.7	9.6e-17	98	143	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E++l+v++ ++lG++ W++Ia++++ Rt++++k++w+++l TRIDC2BG023730.1 98 RGNFTDQEEKLIVHLQALLGNR-WAAIASYLP-ERTDNDIKNYWNTHL 143 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MGRPPCCDKE GVKKGPWTPE EDLVLVSYVQ EHGPGNWRAV PTRTGTHPSI FLPVLAFVLC 60 GSHGCLSTKS LDRCAGLMRC SKSCRLRWTN YLRPGIKRGN FTDQEEKLIV HLQALLGNRW 120 AAIASYLPER TDNDIKNYWN THLKRKLQAG GDAAAKPAAQ RPASSSKGQW E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47600.1	2e-72	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG023730.1