PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG016110.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 147aa MW: 16812.6 Da PI: 7.719 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.6 | 8.5e-20 | 56 | 104 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp + +r++lg+f t+e+Aa+a+++a+++++g TRIDC2BG016110.2 56 YRGIRRRP-WGKWAAEIRDPAK---GARVWLGTFATPEGAARAYDRAARRIRG 104 9*******.**********843...4*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence |
ISDFTPERDH RGGSKRGLCT ADFWPHAAAF DDPTDHHDFY PDEEEPSRKR ERKTMYRGIR 60 RRPWGKWAAE IRDPAKGARV WLGTFATPEG AARAYDRAAR RIRGTKAKVN FPNEDPPLDL 120 DDYDVANGGY NVAGFFHQPP YMAEATF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 48 | 63 | RKRERKTMYRGIRRRP |
2 | 49 | 64 | RKRERKTMYRGIRRRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47520.1 | 9e-25 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG016110.2 |