PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG014820.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 356aa MW: 38296 Da PI: 7.0618

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG014820.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.7	7.9e-52	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+ +yL++++++ ++++ +i++vdiyk++PwdLp+++ ++ ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk+++ TRIDC2BG014820.2 14 LPPGFRFHPTDEELILHYLRNRAAAAPCPV-PIIADVDIYKFDPWDLPSQAVYGDCEWYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIH 105 79**************************.88***********76667789********************************* PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g+ vg+kk Lvfykgr pkg+kt W+mheyrl TRIDC2BG014820.2 106 DAaTGQGVGVKKALVFYKGRPPKGTKTAWIMHEYRL 141 9978888*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MSMAQQGHGA ATSLPPGFRF HPTDEELILH YLRNRAAAAP CPVPIIADVD IYKFDPWDLP 60 SQAVYGDCEW YFFSPRDRKY PNGIRPNRAA GSGYWKATGT DKPIHDAATG QGVGVKKALV 120 FYKGRPPKGT KTAWIMHEYR LAADPLAAAV NTYKPIKFRN VSMRLDDWVL CRIYKKTGLA 180 SLMVPPLADY DHMADHDDLS GGGSTFDDAA CSFYAHSSSS GGACGTMITQ QQPHAGRLPT 240 IPSFSELFDD YSLAQILDAE AEHGATHHLA VHPSLNMLLP VGDSAHGVQP SYYAPSSSSP 300 DTSGGSAGKR KAASPEESSA KRLNGSCFDA PPQSATGWQG AASVLGGLSH QMLPQF

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MSMAQQGHGA ATSLPPGFRF HPTDEELILH YLRNRAAAAP CPVPIIADVD IYKFDPWDLP  60
SQAVYGDCEW YFFSPRDRKY PNGIRPNRAA GSGYWKATGT DKPIHDAATG QGVGVKKALV  120
FYKGRPPKGT KTAWIMHEYR LAADPLAAAV NTYKPIKFRN VSMRLDDWVL CRIYKKTGLA  180
SLMVPPLADY DHMADHDDLS GGGSTFDDAA CSFYAHSSSS GGACGTMITQ QQPHAGRLPT  240
IPSFSELFDD YSLAQILDAE AEHGATHHLA VHPSLNMLLP VGDSAHGVQP SYYAPSSSSP  300
DTSGGSAGKR KAASPEESSA KRLNGSCFDA PPQSATGWQG AASVLGGLSH QMLPQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	4e-76	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG014820.2