PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG014720.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 351aa MW: 38969.1 Da PI: 5.2899

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG014720.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172	1.9e-53	19	149	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdee+v++yL++kv ++++++ +vi++vd++k ePw+Lp +k +ekew+fF++r +ky+tg+r+nratk+gyWkatgkdke++ TRIDC2BG014720.1 19 LPPGFRFHPTDEEVVTHYLTRKVLRESFSC-QVITDVDLNKNEPWELPGLAKMGEKEWFFFVHRGRKYPTGTRTNRATKNGYWKATGKDKEIF 110 79**************************.99***********8888899********************************** PP NAM 94 sk...kgelvglkktLvfykgrapkgektdWvmheyrle 129 + + lvg+kktLvfy+grap+g kt Wvmheyrle TRIDC2BG014720.1 111 RGkgrDAVLVGMKKTLVFYTGRAPSGGKTPWVMHEYRLE 149 984444445**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MSDVTAVMDL EAEERQLALP PGFRFHPTDE EVVTHYLTRK VLRESFSCQV ITDVDLNKNE 60 PWELPGLAKM GEKEWFFFVH RGRKYPTGTR TNRATKNGYW KATGKDKEIF RGKGRDAVLV 120 GMKKTLVFYT GRAPSGGKTP WVMHEYRLEG QLPHRLSRTA KDDWAVCRVI NKDLGARNAP 180 RMEDPLAFLD DLLNNDDLLN NADLLDNADL PMLMDSPSGA DDFAGASSST SSAALPLEAD 240 TEHLTIKMEP PQQMQSPNSF MPATANGNLG GVGYSPYQAM GDQQVAIRRY SKPKAEVASS 300 SALLSPSLGL DTAALAGADT SFLMASSRSY FDLEELFRGE PLMDYSNMWK I

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MSDVTAVMDL EAEERQLALP PGFRFHPTDE EVVTHYLTRK VLRESFSCQV ITDVDLNKNE  60
PWELPGLAKM GEKEWFFFVH RGRKYPTGTR TNRATKNGYW KATGKDKEIF RGKGRDAVLV  120
GMKKTLVFYT GRAPSGGKTP WVMHEYRLEG QLPHRLSRTA KDDWAVCRVI NKDLGARNAP  180
RMEDPLAFLD DLLNNDDLLN NADLLDNADL PMLMDSPSGA DDFAGASSST SSAALPLEAD  240
TEHLTIKMEP PQQMQSPNSF MPATANGNLG GVGYSPYQAM GDQQVAIRRY SKPKAEVASS  300
SALLSPSLGL DTAALAGADT SFLMASSRSY FDLEELFRGE PLMDYSNMWK I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	3e-81	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG014720.1