PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG014700.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 322aa    MW: 35629.2 Da    PI: 5.121
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG014700.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.21.6e-53221521129
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtdee+v++yL++kv ++++++ +vi++vd++k ePw+Lp  +k +ekew+fF+++ +ky+tg+r+nratk+gyWkatgkdke++
  TRIDC2BG014700.1  22 LPPGFRFHPTDEEVVTHYLTRKVLRESFSC-QVITDVDLNKNEPWELPGLAKMGEKEWFFFVHKGRKYPTGTRTNRATKKGYWKATGKDKEIF 113
                       79****************************.99***************8888899************************************** PP

               NAM  94 sk...kgelvglkktLvfykgrapkgektdWvmheyrle 129
                       +    +  lvg+kktLvfy+grap+g kt Wvmheyrle
  TRIDC2BG014700.1 114 RGkgrDAVLVGMKKTLVFYTGRAPSGGKTPWVMHEYRLE 152
                       984444445****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
RSSMSDVTAV MDLEVEEPQL ALPPGFRFHP TDEEVVTHYL TRKVLRESFS CQVITDVDLN  60
KNEPWELPGL AKMGEKEWFF FVHKGRKYPT GTRTNRATKK GYWKATGKDK EIFRGKGRDA  120
VLVGMKKTLV FYTGRAPSGG KTPWVMHEYR LEGELPHRLP RTAKDDWAVC RVFNKDLAAR  180
NAPQMAPAAD GGMEDPLAFL DDLLIDTDLF DDADLPMLMD SPSGADDFAG ASSSTCSAAL  240
PLEPDAELPV LHPQQQQSPN YFFMPATANG NLGGAEYSPY QAMGDQQAAI RRYCKPKAEV  300
ASSSALLSPS LGLDTEQDKT FS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.16e-81NAC family protein