PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG081510.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 268aa    MW: 29254 Da    PI: 9.8466
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG081510.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.62.6e-161044135
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C +C++ ++plWR+gp  ++ LCnaCG ++rkkg+
  TRIDC2AG081510.1 10 CFHCRVMSSPLWRHGPPEKPVLCNACGTRWRKKGT 44
                      ****************88888************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MVKVKKEGPC FHCRVMSSPL WRHGPPEKPV LCNACGTRWR KKGTLENYTP APQVQRKQPK  60
KTPVRTTVKK EPYSDHNSLK TGDAADTFSN NPSAFGSALS YSGSAQSHAR EPLVPSRKKS  120
CVSRRKPSPL ETLVDNLNSI MHEEQLCSGS GLGTIPGSSE EDLLIYHSET PASCFEIGYG  180
SMLLTHPNSV SEANSVPAHS KSYAISQSYL GPASFTLHSG SNGARHELHY SKQHILESKK  240
VEGRGDAGGA FRGLTKSTTR SLKRLYES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47140.16e-29GATA family protein