PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG081300.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 299aa    MW: 33256 Da    PI: 6.6281
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG081300.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.73.9e-5291511128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...............kvkaeekewyfFskrdkkyatgkrknrat 78 
                       +ppGfrFhPt+eelv +yL++kv+++k++l ++i+evd+y++ePwdL++               + +++++ewyfFs +d+ky++g+r+nrat
  TRIDC2AG081300.6   9 VPPGFRFHPTQEELVGYYLARKVAAQKIDL-DIIQEVDLYRIEPWDLQEkcgggrsgrgarqmaEEEQSSSEWYFFSFKDRKYPSGTRTNRAT 100
                       69****************************.99**************955899999999985432222444********************** PP

               NAM  79 ksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++g+Wkatg+dk+v+s+ ++ ++g++ktLvfy+grap+g+ktdW++heyrl
  TRIDC2AG081300.6 101 AAGFWKATGRDKPVMSSrSRGVIGMRKTLVFYRGRAPNGRKTDWIIHEYRL 151
                       ***************9856678***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
HNYQEESCVP PGFRFHPTQE ELVGYYLARK VAAQKIDLDI IQEVDLYRIE PWDLQEKCGG  60
GRSGRGARQM AEEEQSSSEW YFFSFKDRKY PSGTRTNRAT AAGFWKATGR DKPVMSSRSR  120
GVIGMRKTLV FYRGRAPNGR KTDWIIHEYR LQTNEHAPTQ EEGWVVCRAF QKPAPNQRPS  180
YIFPAYPAAP GLGGYYDAQP WLHGQGGDIH YLQSTAGAAS AGGVEFPGQG IQYPDDVLES  240
KQSLFGNIPQ LIESPPTTTA VAGCGDAGYD IVQQGQGAAG IDWNFLDSLL STSQLHLQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.11e-86NAC family protein