PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG081140.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 317aa    MW: 34920.6 Da    PI: 7.2368
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG081140.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B371.79.5e-23109209299
                       EEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                        k+lt+sd+++ g +++p+ +ae           ++ +   l+++d+ gr W++++iyr++++r++lt+GW++Fv+a+ L +gD vvF+  +r
  TRIDC2AG081140.4 109 AKQLTQSDANNGGGFSVPRFCAELVfppldfeADPPVQ--RLRMTDPLGRGWDFRHIYRGTPRRHLLTTGWSKFVNAKLLVAGDAVVFM--RR 197
                       69****************8777555*****96555555..7************************************************..66 PP

                       SEE..EEEEE-S CS
                B3  88 sefelvvkvfrk 99 
                        ++el+ +++r+
  TRIDC2AG081140.4 198 ADGELLAGIRRA 209
                       99999****997 PP
2Auxin_resp49.22.3e-17239313182
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsL 82 
                       a++ a+++ +F+v+Y+Pr+++ eFvv+ ++ve+al   +++G +++m+f   + ++ ++  G+v +v   dp     S Wr+L
  TRIDC2AG081140.4 239 AVRLAAEGAPFTVTYYPRQGAGEFVVPKQEVEDALVGAWAPGVQVRMKFLDAEERRSEWvNGIVKAV---DP-----SIWRML 313
                       6778999******************************************888888888867877665...45.....666666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
DAPPPATPAP LDRDVWLACA TPLSRVPAVG SQVYYFPHGH SEQCPAPPRA PAHNLFPCTV  60
AAVRLFADPK TDEPFATVDL VPGPHRDPAL HLPDADAHAD AATGFRYYAK QLTQSDANNG  120
GGFSVPRFCA ELVFPPLDFE ADPPVQRLRM TDPLGRGWDF RHIYRGTPRR HLLTTGWSKF  180
VNAKLLVAGD AVVFMRRADG ELLAGIRRAP RYPAVSQQGA ERRPRNARAR VPPEEVDEAV  240
RLAAEGAPFT VTYYPRQGAG EFVVPKQEVE DALVGAWAPG VQVRMKFLDA EERRSEWVNG  300
IVKAVDPSIW RMLEAQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77850.19e-76ARF family protein