PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2AG072250.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | WOX | ||||||||
Protein Properties | Length: 193aa MW: 20983.8 Da PI: 8.8432 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.8 | 2.5e-20 | 63 | 122 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++++eq+++Le+l++ r+p+ +++e+++++l +++ ++V++WFqN++a+e++ TRIDC2AG072250.2 63 TRWNPSAEQIKVLEALYRGgMRTPNSAQIERITEELgrhgRIEGKNVFYWFQNHKARERQ 122 8*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 115.4 | 2.7e-37 | 62 | 124 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +tRW+P++eQik+Le+ly+ G+rtPn+++i+rit+eL ++G+ie+kNVfyWFQN+kaRerqkq TRIDC2AG072250.2 62 TTRWNPSAEQIKVLEALYRGGMRTPNSAQIERITEELGRHGRIEGKNVFYWFQNHKARERQKQ 124 69***********************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 193 aa Download sequence |
PSTSPPSELF PFGAFQCLRP LAPKISLPDQ PKKLVAPPDV LGRVRNATKL LSCTVQVPVG 60 GTTRWNPSAE QIKVLEALYR GGMRTPNSAQ IERITEELGR HGRIEGKNVF YWFQNHKARE 120 RQKQKRAALL TLSTLDSSSL PATATKDGAG DKKEACDDAV TSCKRQCRTW GDGHGDAAAE 180 VAAEGCTENV TLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G46480.1 | 9e-34 | WOX family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2AG072250.2 |