PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG071190.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 268aa    MW: 28973 Da    PI: 6.7064
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG071190.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.41.2e-152576155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      s y+GV+++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  TRIDC2AG071190.3 25 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 76
                      57****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MKHMTRQEFV ASLRRKSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTE  60
EEAAEAYDIA AIKFRGLNAV TNFEIGRYNV ESIISSNLPI GNMSGGAGRG SKALESSSPE  120
AAPLPVEAPH SLAFTALPMK YDQQQQDYLS FLALQHHQQG NLQGLGYGLY SSGVNLDFAN  180
AGPGGAMAPH CYGSNGVDLH LQQHDHQQEQ EGEGQQQQHD QHQSMGFGAS TPMAAFSSGG  240
PYESSVTAGS FGYYPNVAAF QTPIFGME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.15e-56AP2 family protein