PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG071190.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 475aa    MW: 51411.6 Da    PI: 6.2004
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG071190.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.82.1e-11133189155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV++++++gr++A+++d  +     ++ k  + g ++ +e+Aa+a++ a++k++g
  TRIDC2AG071190.2 133 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAALKYWG 189
                       57*******************5444.2455536655.779999**************98 PP
2AP248.22.7e-15232283155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV+++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  TRIDC2AG071190.2 232 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 283
                       57****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
MDMDAAHGHY PWLNFSLAHH CEMEEEERGA AAELAAIAGA GPPPKLEDFL GGGANGRNNN  60
DAGRGDQVVS AATAEMYDSE LKFLAAGFLS GASGTTAPTI SPAAAPQEQA DPKMTAPTPE  120
QKKAVDSFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG QSRKGRQGGY DKEEKAARAY  180
DLAALKYWGS STTTNFPVAD YEKEVEEMKH MTRQEFVASL RRKSSGFSRG ASIYRGVTRH  240
HQHGRWQARI GRVAGNKDLY LGTFSTEEEA AEAYDIAAIK FRGLNAVTNF EIGRYNVESI  300
ISSNLPIGNM SGGAGRGSKA LESSSPEAAP LPVEAPHSLA FTALPMKYDQ QQQDYLSFLA  360
LQHHQQGNLQ GLGYGLYSSG VNLDFANAGP GGAMAPHCYG SNGVDLHLQQ HDHQQEQEGE  420
GQQQQHDQHQ SMGFGASTPM AAFSSGGPYE SSVTAGSFGY YPNVAAFQTP IFGME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.11e-122AP2 family protein