PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG069310.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 758aa MW: 83523 Da PI: 5.7192

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG069310.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	33.2	9.3e-11	9	52	54	99
EETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 54 kksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++++r++lt+GW+ Fv a++Lk+gD+v+F ++++ +l+v+v+r+ TRIDC2AG069310.7 9 GQPKRHLLTTGWSLFVGAKRLKAGDSVLFI--RDEKSQLLVGVRRA 52 67899***********************..4577778***97 PP
2	Auxin_resp	114	1.3e-37	77	159	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaas++s F+++YnPr+s+s Fvv+v++++ka +++ svGmR+ m+fete+ss+rr++Gt+vgvsd+dp+rWpnSkWr+L+ TRIDC2AG069310.7 77 AAHAASSGSSFTIYYNPRTSPSPFVVPVARYNKANYIQQSVGMRMAMMFETEESSKRRYTGTIVGVSDSDPMRWPNSKWRNLQ 159 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 758 aa Download sequence
GRFVTFIVGQ PKRHLLTTGW SLFVGAKRLK AGDSVLFIRD EKSQLLVGVR RATNQQSALS 60 SSVLSTDSMH IGVLAAAAHA ASSGSSFTIY YNPRTSPSPF VVPVARYNKA NYIQQSVGMR 120 MAMMFETEES SKRRYTGTIV GVSDSDPMRW PNSKWRNLQI EWDEHGYGER PERVSIWDIE 180 TPENTIVFPS ASLNSKRQCL PGYGVPGLDI ASVNMSPFQR APGNPYGNLQ HMPAVGSELA 240 MMMFLNQSGQ NIGTPLSCHQ SSYSSIIQNV KQNYMPPSTF GHPIGSIKPE SMPSNEVQQQ 300 QQLHAPKMQR GDSESCEVHP ATDSVSASEL HVAGREPRNT DKYPSQSISE QNGKGEPRVK 360 PRRSKKGSSR KTISENSELS SAPSRICDDQ LHVSEAELIS CDTKNVNCGN NEGSSGALTH 420 GDFAGQLQCQ QVEQNELVSP PKLESSISPD GGKSVNSFPN QASFSQFFDG LDWMVQPPYY 480 QDSNGIQSVS ASENIFSPSA NMASTINTDT LETFQNSCLS DCFPNSIQDF VGSPDLHSLT 540 FLSPEMQNLD VHHDGSNVPS TSNSYVQMSF SEDDSGNHME SMQRGMNNIS SCSQPQTTEG 600 FNLGMYSKLP SLKESQVLSL PEIHNSSRGT SSCSMDAAEY SIDRNAKPMK PPVRTYTKVQ 660 KLGSVGRSID VTRYRDYREL RSAIASMFGL QGKLEHPASS DWKLVYVDYE NDVLLVGDDP 720 WEEFINCVRC IRILSPSEVQ QMSENGMQVL NDCIQADQ

Sequence ? help Back to Top

Protein Sequence Length: 758 aa Download sequence

GRFVTFIVGQ PKRHLLTTGW SLFVGAKRLK AGDSVLFIRD EKSQLLVGVR RATNQQSALS  60
SSVLSTDSMH IGVLAAAAHA ASSGSSFTIY YNPRTSPSPF VVPVARYNKA NYIQQSVGMR  120
MAMMFETEES SKRRYTGTIV GVSDSDPMRW PNSKWRNLQI EWDEHGYGER PERVSIWDIE  180
TPENTIVFPS ASLNSKRQCL PGYGVPGLDI ASVNMSPFQR APGNPYGNLQ HMPAVGSELA  240
MMMFLNQSGQ NIGTPLSCHQ SSYSSIIQNV KQNYMPPSTF GHPIGSIKPE SMPSNEVQQQ  300
QQLHAPKMQR GDSESCEVHP ATDSVSASEL HVAGREPRNT DKYPSQSISE QNGKGEPRVK  360
PRRSKKGSSR KTISENSELS SAPSRICDDQ LHVSEAELIS CDTKNVNCGN NEGSSGALTH  420
GDFAGQLQCQ QVEQNELVSP PKLESSISPD GGKSVNSFPN QASFSQFFDG LDWMVQPPYY  480
QDSNGIQSVS ASENIFSPSA NMASTINTDT LETFQNSCLS DCFPNSIQDF VGSPDLHSLT  540
FLSPEMQNLD VHHDGSNVPS TSNSYVQMSF SEDDSGNHME SMQRGMNNIS SCSQPQTTEG  600
FNLGMYSKLP SLKESQVLSL PEIHNSSRGT SSCSMDAAEY SIDRNAKPMK PPVRTYTKVQ  660
KLGSVGRSID VTRYRDYREL RSAIASMFGL QGKLEHPASS DWKLVYVDYE NDVLLVGDDP  720
WEEFINCVRC IRILSPSEVQ QMSENGMQVL NDCIQADQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19850.1	1e-79	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG069310.7