PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG069310.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 855aa    MW: 94712.4 Da    PI: 5.8436
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG069310.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B369.54.4e-2248148199
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k lt sd++++g +++p++ ae+       ++++++ ++l+++d++ + W++++i  ++++r++lt+GW+ Fv a++Lk+gD+v+F   ++
  TRIDC2AG069310.6  48 FCKNLTASDTSTHGGFSVPRRAAEKLfpqldySMQPPN-QELIVRDLHDNMWTFRHI-YRQPKRHLLTTGWSLFVGAKRLKAGDSVLFI--RD 136
                       89*********************999*****9555555.49***************7.5667799************************..45 PP

                       SEE..EEEEE-S CS
                B3  88 sefelvvkvfrk 99 
                       ++ +l+v+v+r+
  TRIDC2AG069310.6 137 EKSQLLVGVRRA 148
                       77778*****97 PP
2Auxin_resp109.24.5e-36173256183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaas++s F+++YnPr+s+s Fvv+v++++ka +++ svGmR+ m+fete+ss+r+  +Gt+vgvsd+dp+rWpnSkWr+L+
  TRIDC2AG069310.6 173 AAHAASSGSSFTIYYNPRTSPSPFVVPVARYNKANYIQQSVGMRMAMMFETEESSKRSRyTGTIVGVSDSDPMRWPNSKWRNLQ 256
                       79****************************************************999766**********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 855 aa     Download sequence    
HNITMHADKD TDEVYAQMTL QPVNSETDVF PIPSLGSYAK SKHPAEYFCK NLTASDTSTH  60
GGFSVPRRAA EKLFPQLDYS MQPPNQELIV RDLHDNMWTF RHIYRQPKRH LLTTGWSLFV  120
GAKRLKAGDS VLFIRDEKSQ LLVGVRRATN QQSALSSSVL STDSMHIGVL AAAAHAASSG  180
SSFTIYYNPR TSPSPFVVPV ARYNKANYIQ QSVGMRMAMM FETEESSKRS RYTGTIVGVS  240
DSDPMRWPNS KWRNLQIEWD EHGYGERPER VSIWDIETPE NTIVFPSASL NSKRQCLPGY  300
GVPGLDIASV NMSPFQRAPG NPYGNLQHMP AVGSELAMMM FLNQSGQNIG TPLSCHQSSY  360
SSIIQNVKQN YMPPSTFGHP IGSIKPESMP SNEVQQQQQL HAPKMQRGDS ESCEVHPATD  420
SVSASELHVA GREPRNTDKY PSQSISEQNG KGEPRVKPRR SKKGSSRKTI SENSELSSAP  480
SRICDDQLHV SEAELISCDT KNVNCGNNEG SSGALTHGDF AGQLQCQQVE QNELVSPPKL  540
ESSISPDGGK SVNSFPNQAS FSQFFDGLDW MVQPPYYQDS NGIQSVSASE NIFSPSANMA  600
STINTDTLET FQNSCLSDCF PNSIQDFVGS PDLHSLTFLS PEMQNLDVHH DGSNVPSTSN  660
SYVQMSFSED DSGNHMESMQ RGMNNISSCS QPQTTEGFNL GMYSKLPSLK ESQVLSLPEI  720
HNSSRGTSSC SMDAAEYSID RNAKPMKPPV RTYTKVQKLG SVGRSIDVTR YRDYRELRSA  780
IASMFGLQGK LEHPASSDWK LVYVDYENDV LLVGDDPWEE FINCVRCIRI LSPSEVQQMS  840
ENGMQVLNDC IQADQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.11e-143ARF family protein