PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG069310.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 903aa    MW: 100036 Da    PI: 6.1422
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG069310.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B369.44.7e-2297197199
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k lt sd++++g +++p++ ae+       ++++++ ++l+++d++ + W++++i  ++++r++lt+GW+ Fv a++Lk+gD+v+F   ++
  TRIDC2AG069310.5  97 FCKNLTASDTSTHGGFSVPRRAAEKLfpqldySMQPPN-QELIVRDLHDNMWTFRHI-YRQPKRHLLTTGWSLFVGAKRLKAGDSVLFI--RD 185
                       89*********************999*****9555555.49***************7.5667799************************..45 PP

                       SEE..EEEEE-S CS
                B3  88 sefelvvkvfrk 99 
                       ++ +l+v+v+r+
  TRIDC2AG069310.5 186 EKSQLLVGVRRA 197
                       77778*****97 PP
2Auxin_resp113.71.7e-37222304183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaas++s F+++YnPr+s+s Fvv+v++++ka +++ svGmR+ m+fete+ss+rr++Gt+vgvsd+dp+rWpnSkWr+L+
  TRIDC2AG069310.5 222 AAHAASSGSSFTIYYNPRTSPSPFVVPVARYNKANYIQQSVGMRMAMMFETEESSKRRYTGTIVGVSDSDPMRWPNSKWRNLQ 304
                       79*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 903 aa     Download sequence    
PLVCLPQRGS LVYYFPQGHS EQVAATTKKT PNSRIPNYPS LPSQLLCQVH NITMHADKDT  60
DEVYAQMTLQ PVNSETDVFP IPSLGSYAKS KHPAEYFCKN LTASDTSTHG GFSVPRRAAE  120
KLFPQLDYSM QPPNQELIVR DLHDNMWTFR HIYRQPKRHL LTTGWSLFVG AKRLKAGDSV  180
LFIRDEKSQL LVGVRRATNQ QSALSSSVLS TDSMHIGVLA AAAHAASSGS SFTIYYNPRT  240
SPSPFVVPVA RYNKANYIQQ SVGMRMAMMF ETEESSKRRY TGTIVGVSDS DPMRWPNSKW  300
RNLQIEWDEH GYGERPERVS IWDIETPENT IVFPSASLNS KRQCLPGYGV PGLDIASVNM  360
SPFQRAPGNP YGNLQHMPAV GSELAMMMFL NQSGQNIGTP LSCHQSSYSS IIQNVKQNYM  420
PPSTFGHPIG SIKPESMPSN EVQQQQQLHA PKMQRGDSES CEVHPATDSV SASELHVAGR  480
EPRNTDKYPS QSISEQNGKG EPRVKPRRSK KGSSRKTISE NSELSSAPSR ICDDQLHVSE  540
AELISCDTKN VNCGNNEGSS GALTHGDFAG QLQCQQVEQN ELVSPPKLES SISPDGGKSV  600
NSFPNQASFS QFFDGLDWMV QPPYYQDSNG IQSVSASENI FSPSANMAST INTDTLETFQ  660
NSCLSDCFPN SIQDFVGSPD LHSLTFLSPE MQNLDVHHDG SNVPSTSNSY VQMSFSEDDS  720
GNHMESMQRG MNNISSCSQP QTTEGFNLGM YSKLPSLKES QVLSLPEIHN SSRGTSSCSM  780
DAAEYSIDRN AKPMKPPVRT YTKVQKLGSV GRSIDVTRYR DYRELRSAIA SMFGLQGKLE  840
HPASSDWKLV YVDYENDVLL VGDDPWEEFI NCVRCIRILS PSEVQQMSEN GMQVLNDCIQ  900
ADQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.11e-175ARF family protein