PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG069310.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 955aa    MW: 105531 Da    PI: 6.1237
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG069310.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.61.2e-23148249199
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k lt sd++++g +++p++ ae+       ++++++ ++l+++d++ + W++++iyr++++r++lt+GW+ Fv a++Lk+gD+v+F   ++
  TRIDC2AG069310.4 148 FCKNLTASDTSTHGGFSVPRRAAEKLfpqldySMQPPN-QELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFI--RD 237
                       89*********************999*****9555555.49************************************************..45 PP

                       SEE..EEEEE-S CS
                B3  88 sefelvvkvfrk 99 
                       ++ +l+v+v+r+
  TRIDC2AG069310.4 238 EKSQLLVGVRRA 249
                       77778*****97 PP
2Auxin_resp113.61.8e-37274356183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaas++s F+++YnPr+s+s Fvv+v++++ka +++ svGmR+ m+fete+ss+rr++Gt+vgvsd+dp+rWpnSkWr+L+
  TRIDC2AG069310.4 274 AAHAASSGSSFTIYYNPRTSPSPFVVPVARYNKANYIQQSVGMRMAMMFETEESSKRRYTGTIVGVSDSDPMRWPNSKWRNLQ 356
                       79*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 955 aa     Download sequence    
MAAASQEKQQ QLPTFGVLRN AAALLDEMQL MGEAQGAKKV INSELWHACA GPLVCLPQRG  60
SLVYYFPQGH SEQVAATTKK TPNSRIPNYP SLPSQLLCQV HNITMHADKD TDEVYAQMTL  120
QPVNSETDVF PIPSLGSYAK SKHPAEYFCK NLTASDTSTH GGFSVPRRAA EKLFPQLDYS  180
MQPPNQELIV RDLHDNMWTF RHIYRGQPKR HLLTTGWSLF VGAKRLKAGD SVLFIRDEKS  240
QLLVGVRRAT NQQSALSSSV LSTDSMHIGV LAAAAHAASS GSSFTIYYNP RTSPSPFVVP  300
VARYNKANYI QQSVGMRMAM MFETEESSKR RYTGTIVGVS DSDPMRWPNS KWRNLQIEWD  360
EHGYGERPER VSIWDIETPE NTIVFPSASL NSKRQCLPGY GVPGLDIASV NMSPFQRAPG  420
NPYGNLQHMP AVGSELAMMM FLNQSGQNIG TPLSCHQSSY SSIIQNVKQN YMPPSTFGHP  480
IGSIKPESMP SNEVQQQQQL HAPKMQRGDS ESCEVHPATD SVSASELHVA GREPRNTDKY  540
PSQSISEQNG KGEPRVKPRR SKKGSSRKTI SENSELSSAP SRICDDQLHV SEAELISCDT  600
KNVNCGNNEG SSGALTHGDF AGQLQCQQVE QNELVSPPKL ESSISPDGGK SVNSFPNQAS  660
FSQFFDGLDW MVQPPYYQDS NGIQSVSASE NIFSPSANMA STINTDTLET FQNSCLSDCF  720
PNSIQDFVGS PDLHSLTFLS PEMQNLDVHH DGSNVPSTSN SYVQMSFSED DSGNHMESMQ  780
RGMNNISSCS QPQTTEGFNL GMYSKLPSLK ESQVLSLPEI HNSSRGTSSC SMDAAEYSID  840
RNAKPMKPPV RTYTKVQKLG SVGRSIDVTR YRDYRELRSA IASMFGLQGK LEHPASSDWK  900
LVYVDYENDV LLVGDDPWEE FINCVRCIRI LSPSEVQQMS ENGMQVLNDC IQADQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein