PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG069310.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 753aa MW: 83035.4 Da PI: 5.7192

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG069310.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	35	2.5e-11	2	47	52	99
.EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 52 yrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 yr++++r++lt+GW+ Fv a++Lk+gD+v+F ++++ +l+v+v+r+ TRIDC2AG069310.3 2 YRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFI--RDEKSQLLVGVRRA 47 69999*************************..4577778***97 PP
2	Auxin_resp	114	1.3e-37	72	154	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaas++s F+++YnPr+s+s Fvv+v++++ka +++ svGmR+ m+fete+ss+rr++Gt+vgvsd+dp+rWpnSkWr+L+ TRIDC2AG069310.3 72 AAHAASSGSSFTIYYNPRTSPSPFVVPVARYNKANYIQQSVGMRMAMMFETEESSKRRYTGTIVGVSDSDPMRWPNSKWRNLQ 154 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 753 aa Download sequence
IYRGQPKRHL LTTGWSLFVG AKRLKAGDSV LFIRDEKSQL LVGVRRATNQ QSALSSSVLS 60 TDSMHIGVLA AAAHAASSGS SFTIYYNPRT SPSPFVVPVA RYNKANYIQQ SVGMRMAMMF 120 ETEESSKRRY TGTIVGVSDS DPMRWPNSKW RNLQIEWDEH GYGERPERVS IWDIETPENT 180 IVFPSASLNS KRQCLPGYGV PGLDIASVNM SPFQRAPGNP YGNLQHMPAV GSELAMMMFL 240 NQSGQNIGTP LSCHQSSYSS IIQNVKQNYM PPSTFGHPIG SIKPESMPSN EVQQQQQLHA 300 PKMQRGDSES CEVHPATDSV SASELHVAGR EPRNTDKYPS QSISEQNGKG EPRVKPRRSK 360 KGSSRKTISE NSELSSAPSR ICDDQLHVSE AELISCDTKN VNCGNNEGSS GALTHGDFAG 420 QLQCQQVEQN ELVSPPKLES SISPDGGKSV NSFPNQASFS QFFDGLDWMV QPPYYQDSNG 480 IQSVSASENI FSPSANMAST INTDTLETFQ NSCLSDCFPN SIQDFVGSPD LHSLTFLSPE 540 MQNLDVHHDG SNVPSTSNSY VQMSFSEDDS GNHMESMQRG MNNISSCSQP QTTEGFNLGM 600 YSKLPSLKES QVLSLPEIHN SSRGTSSCSM DAAEYSIDRN AKPMKPPVRT YTKVQKLGSV 660 GRSIDVTRYR DYRELRSAIA SMFGLQGKLE HPASSDWKLV YVDYENDVLL VGDDPWEEFI 720 NCVRCIRILS PSEVQQMSEN GMQVLNDCIQ ADQ

Sequence ? help Back to Top

Protein Sequence Length: 753 aa Download sequence

IYRGQPKRHL LTTGWSLFVG AKRLKAGDSV LFIRDEKSQL LVGVRRATNQ QSALSSSVLS  60
TDSMHIGVLA AAAHAASSGS SFTIYYNPRT SPSPFVVPVA RYNKANYIQQ SVGMRMAMMF  120
ETEESSKRRY TGTIVGVSDS DPMRWPNSKW RNLQIEWDEH GYGERPERVS IWDIETPENT  180
IVFPSASLNS KRQCLPGYGV PGLDIASVNM SPFQRAPGNP YGNLQHMPAV GSELAMMMFL  240
NQSGQNIGTP LSCHQSSYSS IIQNVKQNYM PPSTFGHPIG SIKPESMPSN EVQQQQQLHA  300
PKMQRGDSES CEVHPATDSV SASELHVAGR EPRNTDKYPS QSISEQNGKG EPRVKPRRSK  360
KGSSRKTISE NSELSSAPSR ICDDQLHVSE AELISCDTKN VNCGNNEGSS GALTHGDFAG  420
QLQCQQVEQN ELVSPPKLES SISPDGGKSV NSFPNQASFS QFFDGLDWMV QPPYYQDSNG  480
IQSVSASENI FSPSANMAST INTDTLETFQ NSCLSDCFPN SIQDFVGSPD LHSLTFLSPE  540
MQNLDVHHDG SNVPSTSNSY VQMSFSEDDS GNHMESMQRG MNNISSCSQP QTTEGFNLGM  600
YSKLPSLKES QVLSLPEIHN SSRGTSSCSM DAAEYSIDRN AKPMKPPVRT YTKVQKLGSV  660
GRSIDVTRYR DYRELRSAIA SMFGLQGKLE HPASSDWKLV YVDYENDVLL VGDDPWEEFI  720
NCVRCIRILS PSEVQQMSEN GMQVLNDCIQ ADQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19850.1	3e-82	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG069310.3