PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG069310.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 767aa MW: 84913.6 Da PI: 5.9018

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG069310.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.3	3.6e-15	2	61	37	99
EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 37 tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++d++ + W++++i ++++r++lt+GW+ Fv a++Lk+gD+v+F ++++ +l+v+v+r+ TRIDC2AG069310.2 2 IVRDLHDNMWTFRHI-YRQPKRHLLTTGWSLFVGAKRLKAGDSVLFI--RDEKSQLLVGVRRA 61 789*********7.5667799********************..4577778***97 PP
2	Auxin_resp	114	1.4e-37	86	168	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaas++s F+++YnPr+s+s Fvv+v++++ka +++ svGmR+ m+fete+ss+rr++Gt+vgvsd+dp+rWpnSkWr+L+ TRIDC2AG069310.2 86 AAHAASSGSSFTIYYNPRTSPSPFVVPVARYNKANYIQQSVGMRMAMMFETEESSKRRYTGTIVGVSDSDPMRWPNSKWRNLQ 168 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 767 aa Download sequence
LIVRDLHDNM WTFRHIYRQP KRHLLTTGWS LFVGAKRLKA GDSVLFIRDE KSQLLVGVRR 60 ATNQQSALSS SVLSTDSMHI GVLAAAAHAA SSGSSFTIYY NPRTSPSPFV VPVARYNKAN 120 YIQQSVGMRM AMMFETEESS KRRYTGTIVG VSDSDPMRWP NSKWRNLQIE WDEHGYGERP 180 ERVSIWDIET PENTIVFPSA SLNSKRQCLP GYGVPGLDIA SVNMSPFQRA PGNPYGNLQH 240 MPAVGSELAM MMFLNQSGQN IGTPLSCHQS SYSSIIQNVK QNYMPPSTFG HPIGSIKPES 300 MPSNEVQQQQ QLHAPKMQRG DSESCEVHPA TDSVSASELH VAGREPRNTD KYPSQSISEQ 360 NGKGEPRVKP RRSKKGSSRK TISENSELSS APSRICDDQL HVSEAELISC DTKNVNCGNN 420 EGSSGALTHG DFAGQLQCQQ VEQNELVSPP KLESSISPDG GKSVNSFPNQ ASFSQFFDGL 480 DWMVQPPYYQ DSNGIQSVSA SENIFSPSAN MASTINTDTL ETFQNSCLSD CFPNSIQDFV 540 GSPDLHSLTF LSPEMQNLDV HHDGSNVPST SNSYVQMSFS EDDSGNHMES MQRGMNNISS 600 CSQPQTTEGF NLGMYSKLPS LKESQVLSLP EIHNSSRGTS SCSMDAAEYS IDRNAKPMKP 660 PVRTYTKVQK LGSVGRSIDV TRYRDYRELR SAIASMFGLQ GKLEHPASSD WKLVYVDYEN 720 DVLLVGDDPW EEFINCVRCI RILSPSEVQQ MSENGMQVLN DCIQADQ

Sequence ? help Back to Top

Protein Sequence Length: 767 aa Download sequence

LIVRDLHDNM WTFRHIYRQP KRHLLTTGWS LFVGAKRLKA GDSVLFIRDE KSQLLVGVRR  60
ATNQQSALSS SVLSTDSMHI GVLAAAAHAA SSGSSFTIYY NPRTSPSPFV VPVARYNKAN  120
YIQQSVGMRM AMMFETEESS KRRYTGTIVG VSDSDPMRWP NSKWRNLQIE WDEHGYGERP  180
ERVSIWDIET PENTIVFPSA SLNSKRQCLP GYGVPGLDIA SVNMSPFQRA PGNPYGNLQH  240
MPAVGSELAM MMFLNQSGQN IGTPLSCHQS SYSSIIQNVK QNYMPPSTFG HPIGSIKPES  300
MPSNEVQQQQ QLHAPKMQRG DSESCEVHPA TDSVSASELH VAGREPRNTD KYPSQSISEQ  360
NGKGEPRVKP RRSKKGSSRK TISENSELSS APSRICDDQL HVSEAELISC DTKNVNCGNN  420
EGSSGALTHG DFAGQLQCQQ VEQNELVSPP KLESSISPDG GKSVNSFPNQ ASFSQFFDGL  480
DWMVQPPYYQ DSNGIQSVSA SENIFSPSAN MASTINTDTL ETFQNSCLSD CFPNSIQDFV  540
GSPDLHSLTF LSPEMQNLDV HHDGSNVPST SNSYVQMSFS EDDSGNHMES MQRGMNNISS  600
CSQPQTTEGF NLGMYSKLPS LKESQVLSLP EIHNSSRGTS SCSMDAAEYS IDRNAKPMKP  660
PVRTYTKVQK LGSVGRSIDV TRYRDYRELR SAIASMFGLQ GKLEHPASSD WKLVYVDYEN  720
DVLLVGDDPW EEFINCVRCI RILSPSEVQQ MSENGMQVLN DCIQADQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19850.1	1e-90	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG069310.2