PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG069310.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 769aa MW: 85099.8 Da PI: 5.8006

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG069310.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.7	3.9e-17	1	63	35	99
EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +l+++d++ + W++++iyr++++r++lt+GW+ Fv a++Lk+gD+v+F ++++ +l+v+v+r+ TRIDC2AG069310.1 1 ELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFI--RDEKSQLLVGVRRA 63 5789*******************************************..4577778***97 PP
2	Auxin_resp	114	1.4e-37	88	170	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaas++s F+++YnPr+s+s Fvv+v++++ka +++ svGmR+ m+fete+ss+rr++Gt+vgvsd+dp+rWpnSkWr+L+ TRIDC2AG069310.1 88 AAHAASSGSSFTIYYNPRTSPSPFVVPVARYNKANYIQQSVGMRMAMMFETEESSKRRYTGTIVGVSDSDPMRWPNSKWRNLQ 170 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 769 aa Download sequence
ELIVRDLHDN MWTFRHIYRG QPKRHLLTTG WSLFVGAKRL KAGDSVLFIR DEKSQLLVGV 60 RRATNQQSAL SSSVLSTDSM HIGVLAAAAH AASSGSSFTI YYNPRTSPSP FVVPVARYNK 120 ANYIQQSVGM RMAMMFETEE SSKRRYTGTI VGVSDSDPMR WPNSKWRNLQ IEWDEHGYGE 180 RPERVSIWDI ETPENTIVFP SASLNSKRQC LPGYGVPGLD IASVNMSPFQ RAPGNPYGNL 240 QHMPAVGSEL AMMMFLNQSG QNIGTPLSCH QSSYSSIIQN VKQNYMPPST FGHPIGSIKP 300 ESMPSNEVQQ QQQLHAPKMQ RGDSESCEVH PATDSVSASE LHVAGREPRN TDKYPSQSIS 360 EQNGKGEPRV KPRRSKKGSS RKTISENSEL SSAPSRICDD QLHVSEAELI SCDTKNVNCG 420 NNEGSSGALT HGDFAGQLQC QQVEQNELVS PPKLESSISP DGGKSVNSFP NQASFSQFFD 480 GLDWMVQPPY YQDSNGIQSV SASENIFSPS ANMASTINTD TLETFQNSCL SDCFPNSIQD 540 FVGSPDLHSL TFLSPEMQNL DVHHDGSNVP STSNSYVQMS FSEDDSGNHM ESMQRGMNNI 600 SSCSQPQTTE GFNLGMYSKL PSLKESQVLS LPEIHNSSRG TSSCSMDAAE YSIDRNAKPM 660 KPPVRTYTKV QKLGSVGRSI DVTRYRDYRE LRSAIASMFG LQGKLEHPAS SDWKLVYVDY 720 ENDVLLVGDD PWEEFINCVR CIRILSPSEV QQMSENGMQV LNDCIQADQ

Sequence ? help Back to Top

Protein Sequence Length: 769 aa Download sequence

ELIVRDLHDN MWTFRHIYRG QPKRHLLTTG WSLFVGAKRL KAGDSVLFIR DEKSQLLVGV  60
RRATNQQSAL SSSVLSTDSM HIGVLAAAAH AASSGSSFTI YYNPRTSPSP FVVPVARYNK  120
ANYIQQSVGM RMAMMFETEE SSKRRYTGTI VGVSDSDPMR WPNSKWRNLQ IEWDEHGYGE  180
RPERVSIWDI ETPENTIVFP SASLNSKRQC LPGYGVPGLD IASVNMSPFQ RAPGNPYGNL  240
QHMPAVGSEL AMMMFLNQSG QNIGTPLSCH QSSYSSIIQN VKQNYMPPST FGHPIGSIKP  300
ESMPSNEVQQ QQQLHAPKMQ RGDSESCEVH PATDSVSASE LHVAGREPRN TDKYPSQSIS  360
EQNGKGEPRV KPRRSKKGSS RKTISENSEL SSAPSRICDD QLHVSEAELI SCDTKNVNCG  420
NNEGSSGALT HGDFAGQLQC QQVEQNELVS PPKLESSISP DGGKSVNSFP NQASFSQFFD  480
GLDWMVQPPY YQDSNGIQSV SASENIFSPS ANMASTINTD TLETFQNSCL SDCFPNSIQD  540
FVGSPDLHSL TFLSPEMQNL DVHHDGSNVP STSNSYVQMS FSEDDSGNHM ESMQRGMNNI  600
SSCSQPQTTE GFNLGMYSKL PSLKESQVLS LPEIHNSSRG TSSCSMDAAE YSIDRNAKPM  660
KPPVRTYTKV QKLGSVGRSI DVTRYRDYRE LRSAIASMFG LQGKLEHPAS SDWKLVYVDY  720
ENDVLLVGDD PWEEFINCVR CIRILSPSEV QQMSENGMQV LNDCIQADQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19850.1	6e-94	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG069310.1