PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG065740.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 160aa MW: 17961.4 Da PI: 10.0092 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 162.6 | 1.5e-50 | 11 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrFhP+d+elv +yL++k++g v + +vd++k+ePw+Lp ++ + kewyfFs++d+kyatg+r+nrat++gyWkatgkd+ TRIDC2AG065740.4 11 LPPGFRFHPRDHELVLDYLCHKLSGGGgRGGGGVdMVDVDLNKCEPWELPDAACVGGKEWYFFSRHDRKYATGQRTNRATHTGYWKATGKDRV 103 79**********************999533334569999***********7666789************************************ PP NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ ++vg++ktLvfy grap+g+kt+Wvmhe+r+ TRIDC2AG065740.4 104 ITGDgAAAVVGMRKTLVFYLGRAPRGTKTEWVMHEFRV 141 **9755667***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
SSSMSMVEAR LPPGFRFHPR DHELVLDYLC HKLSGGGGRG GGGVDMVDVD LNKCEPWELP 60 DAACVGGKEW YFFSRHDRKY ATGQRTNRAT HTGYWKATGK DRVITGDGAA AVVGMRKTLV 120 FYLGRAPRGT KTEWVMHEFR VEGRPPRSVH YNKKWNPAPL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 35 | 43 | GGGGRGGGG |
2 | 36 | 44 | GGGGRGGGG |
3 | 37 | 45 | GGGGRGGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12977.1 | 1e-65 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG065740.4 |