PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG065150.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 393aa    MW: 42340 Da    PI: 7.5759
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG065150.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.81.9e-162367147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r +WT+eE++l+++a +++G   W++I +++g ++t+ q++s+ qk+
  TRIDC2AG065150.2 23 REKWTEEEHKLFLEAMQLHGRA-WRRIQEHIG-TKTAVQIRSHAQKF 67
                      789*****************88.*********.************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
DTRMMAEARA PKARKPYMIT KQREKWTEEE HKLFLEAMQL HGRAWRRIQE HIGTKTAVQI  60
RSHAQKFFSK VTRDSSGDSG GSSSGGAGPP IQIPPPRPKR KSVHPYPCNQ RSAQPGKHAH  120
AALLRVDKPQ LSMCEQGNGS PTSVVTTSQI GLGGSESFDS DTSTIDVEER CPTPSTGTAE  180
VAVLAPPTND SKKSKGSSGT SEEVVCDNTS DAPVLKLFGK TVVVNESHQL PNPGTCNLQT  240
AADMELDTSA ETPTSAPEAN TWSPWLANSQ QFMYYVPQGA VFFGYNNGSV PYPVSSSPKA  300
DQQHQQHASE AAAELRRREA SSNTASSSVA ETTARNSAES CTGAVGGDDE MVHAAGLRER  360
VSPAFVQQRG FMPYKRCAAE SKAMQPQAPR EEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18330.18e-34MYB_related family protein