PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG064060.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 285aa MW: 31180.6 Da PI: 10.9204

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG064060.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.6	1.1e-13	70	121	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++ + + a+i+ A++++k+L+ TRIDC2AG064060.5 70 QRMTHIAVERNRRRQMNEYLAVLRSLMPES---YAHRGDQASIVGGAIDFVKELE 121 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
DAGCPVRGRR RPRLRHLQRG GGPAWMAGSA AAEAPAVTIV PVEEGEKAQG RRKRRRRARS 60 CKNREDAESQ RMTHIAVERN RRRQMNEYLA VLRSLMPESY AHRGDQASIV GGAIDFVKEL 120 EQLLQSLEAQ KRTLLAQPQQ EHKPLPIRDA MPSSSKTVTA AATTTTSSGS GEGKQASAMR 180 EGMGPPFAGF FTYPQYVCRL PPRDDADDRA GAADIEVTLV ETHANVRVMA PRRPGQLLRM 240 VAGMEALRLT VLHLNVTTLG SLALYSLSVK KDQKHVGSST ASKIA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	51	57	RRKRRRR
2	52	56	RKRRR
3	52	59	RKRRRRAR
4	71	82	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	4e-52	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG064060.5