PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG064060.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 315aa MW: 34130.9 Da PI: 8.0601 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.4 | 1.3e-13 | 88 | 139 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++ + + a+i+ A++++k+L+ TRIDC2AG064060.3 88 QRMTHIAVERNRRRQMNEYLAVLRSLMPES---YAHRGDQASIVGGAIDFVKELE 139 79****************************...9******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
MTLDALCAAG DVLVYDTFNA AAAVSAAPAE SSLLFCDVAG AAWMAGSAAA EAPAVTIVPV 60 EEGEKAQGRR KRRRRARSCK NREDAESQRM THIAVERNRR RQMNEYLAVL RSLMPESYAH 120 RGDQASIVGG AIDFVKELEQ LLQSLEAQKR TLLAQPQQEH KPLPIRDAMP SSSKTVTAAA 180 TTTTSSGSGE GKQASAMREG MGPPFAGFFT YPQYVCRLPP RDDADDRAGA ADIEVTLVET 240 HANVRVMAPR RPGQLLRMVA GMEALRLTVL HLNVTTLGSL ALYSLSVKKD QKHVGSMNFA 300 PDECDCRQSS GFMCF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 69 | 75 | RRKRRRR |
2 | 70 | 74 | RKRRR |
3 | 70 | 77 | RKRRRRAR |
4 | 89 | 100 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22490.1 | 2e-51 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG064060.3 |