PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG062690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 209aa MW: 24701.7 Da PI: 7.5107 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 29.6 | 1.8e-09 | 1 | 38 | 45 | 86 |
trihelix 45 rspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 r++ qCk+kw+nl +ryk ++++ + + ++cp+f++l+ TRIDC2AG062690.1 1 RTADQCKCKWKNLVNRYKGKETSDPE----TGRQCPFFEELH 38 899****************9999997....4678******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
RTADQCKCKW KNLVNRYKGK ETSDPETGRQ CPFFEELHAV FTERAKNMQR QLLQSESGTS 60 VKKKLKRPSG DQSSGESDEN EYGVEVSDDE KPVISKKRKA GDKGQPSQRM AENSRAGSSS 120 IHDLLQEFLV QQQHVDMLWH ETMERRAQER LIFEQEWRQS MQKLEQERLM LEQSWIEREE 180 QRRMREEARA QKRDSLMTTL LNKLLQEDL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 63 | 99 | KKLKRPSGDQSSGESDENEYGVEVSDDEKPVISKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38250.1 | 3e-23 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG062690.1 |