PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG061600.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 240aa    MW: 24616 Da    PI: 10.1752
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG061600.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-194999155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                      ++++GVr ++ +gr++AeIrdp     r +r++lg+f+tae Aa+a++aa++ ++g
  TRIDC2AG061600.2 49 PRFRGVRKRP-WGRYAAEIRDP---A-RkARVWLGTFDTAEAAARAYDAAALHYRG 99
                      689*******.**********8...2.35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
APTSHTNQPT PHPAQPPPQQ PPRRTLAMAP KNAAPVVAAA AAADAGMEPR FRGVRKRPWG  60
RYAAEIRDPA RKARVWLGTF DTAEAAARAY DAAALHYRGP KAKTNFPVGT VAAFAHVPLP  120
PPKALAVSPS SSTVESSSRD TPAAPPAAPA PPPALDLSLA MPAMVAAQPF LFLDPRVAVT  180
VAVAAPAPAP CRSAAISGMN KAASREEEQS DTGSSSSVVD ASPAVGVGFD LNLPPPVEMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.18e-22ERF family protein