PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG059930.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 332aa MW: 36650.1 Da PI: 8.4841 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 37.2 | 6.8e-12 | 25 | 70 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W +eEd l++ v+ +G+++W++I ++ + Rt+k+c++rw + TRIDC2AG059930.2 25 KGPWMAEEDAVLLEHVRTHGPRDWSSIRSKGALQRTGKSCRLRWVN 70 79*************************998889***********87 PP | |||||||
2 | Myb_DNA-binding | 37.4 | 5.7e-12 | 81 | 121 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++++E+ +++ +q+G++ W++Ia ++ gRt++++k++w TRIDC2AG059930.2 81 KFSADEERVVIELQAQFGNK-WARIATYLA-GRTDNDVKNFWS 121 79******************.*********.***********5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MARAPGGAAR RRGGRRDGGG EAVRKGPWMA EEDAVLLEHV RTHGPRDWSS IRSKGALQRT 60 GKSCRLRWVN KLRPNLKTGC KFSADEERVV IELQAQFGNK WARIATYLAG RTDNDVKNFW 120 STRQKRLARL LRAPLRARPS KTRSSNTKAP ASSLESAMER QGSCHDHVPS VGNSSGGQSF 180 PAAPPMEHQD TARISHDQMC SGFLSFEPLP LQAAAPSTTE GEASSSNAAY YQLAPESSFY 240 HHPYHLLEFP GLPERCGVDP GFVGASAMDD LAYHDLLPPL HPAPMMMPFF GMEYSRDGIK 300 VETRENFFDD LPPDVFDSFD QVPPPFSPSA TN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 13 | 20 | GGRRDGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60460.1 | 6e-61 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG059930.2 |