PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG059930.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 285aa    MW: 31520.4 Da    PI: 7.2661
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG059930.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.74.6e-123474345
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      +++++E+   +++ +q+G++ W++Ia ++  gRt++++k++w 
  TRIDC2AG059930.1 34 KFSADEERVVIELQAQFGNK-WARIATYLA-GRTDNDVKNFWS 74
                      79******************.*********.***********5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
WSSIRSKGAL QRTGKSCRLR WVNKLRPNLK TGCKFSADEE RVVIELQAQF GNKWARIATY  60
LAGRTDNDVK NFWSTRQKRL ARLLRAPLRA RPSKTRSSNT KAPASSLESA MGSCHDHVPS  120
VGNSSGGQSF PAAPPMEHQD TARISHDQMC SGFLSFEPLP LQAAAPSTTE GEASSSNAAY  180
YQLAPESSFY HHPYHLLEFP GLPERCGVDP GFVGASAMDD LAYHDLLPPL HPAPMMMPFF  240
GMEYSRDGIK VETRENFFDD LPPDVFDSFD QVPPPFSPSA TNSEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.12e-47MYB family protein